Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CSF1P09603 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CSF1P09603 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSF1P09603 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSF1P09603 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSF1P09603 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSF1P09603 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSF1P09603 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSF1P09603 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CSF1P09603 BX664725.1-201ENST00000438252 379 ntBASIC18.73■□□□□ 0.59
CSF1P09603 LONRF2P2-201ENST00000439212 571 ntBASIC18.73■□□□□ 0.59
CSF1P09603 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSF1P09603 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSF1P09603 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CSF1P09603 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CSF1P09603 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.73■□□□□ 0.59
CSF1P09603 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.73■□□□□ 0.59
CSF1P09603 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSF1P09603 AC005229.4-201ENST00000610085 2198 ntBASIC18.72■□□□□ 0.59
CSF1P09603 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.72■□□□□ 0.59
CSF1P09603 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSF1P09603 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSF1P09603 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSF1P09603 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSF1P09603 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CSF1P09603 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.72■□□□□ 0.59
CSF1P09603 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CSF1P09603 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSF1P09603 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSF1P09603 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSF1P09603 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CSF1P09603 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CSF1P09603 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
CSF1P09603 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.71■□□□□ 0.59
CSF1P09603 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSF1P09603 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSF1P09603 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSF1P09603 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CSF1P09603 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.71■□□□□ 0.59
CSF1P09603 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.71■□□□□ 0.59
CSF1P09603 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.71■□□□□ 0.59
CSF1P09603 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSF1P09603 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.71■□□□□ 0.59
CSF1P09603 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSF1P09603 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSF1P09603 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSF1P09603 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.71■□□□□ 0.59
CSF1P09603 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSF1P09603 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.58
CSF1P09603 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CSF1P09603 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSF1P09603 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSF1P09603 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.7■□□□□ 0.58
CSF1P09603 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSF1P09603 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSF1P09603 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSF1P09603 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.7■□□□□ 0.58
CSF1P09603 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.69■□□□□ 0.58
CSF1P09603 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSF1P09603 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSF1P09603 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CSF1P09603 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSF1P09603 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.69■□□□□ 0.58
CSF1P09603 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSF1P09603 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSF1P09603 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.69■□□□□ 0.58
CSF1P09603 AC022616.5-201ENST00000518796 181 ntBASIC18.69■□□□□ 0.58
CSF1P09603 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.69■□□□□ 0.58
CSF1P09603 AL121603.2-201ENST00000557373 2117 ntBASIC18.69■□□□□ 0.58
CSF1P09603 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.69■□□□□ 0.58
CSF1P09603 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSF1P09603 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.69■□□□□ 0.58
CSF1P09603 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSF1P09603 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSF1P09603 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.69■□□□□ 0.58
CSF1P09603 AC244015.2-201ENST00000616358 1861 ntBASIC18.69■□□□□ 0.58
CSF1P09603 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CSF1P09603 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CSF1P09603 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.68■□□□□ 0.58
CSF1P09603 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSF1P09603 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSF1P09603 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CSF1P09603 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSF1P09603 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CSF1P09603 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.68■□□□□ 0.58
CSF1P09603 MIR4787-201ENST00000607364 84 ntBASIC18.68■□□□□ 0.58
CSF1P09603 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.68■□□□□ 0.58
CSF1P09603 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSF1P09603 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CSF1P09603 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSF1P09603 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSF1P09603 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.68■□□□□ 0.58
CSF1P09603 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.68■□□□□ 0.58
CSF1P09603 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSF1P09603 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSF1P09603 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSF1P09603 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSF1P09603 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSF1P09603 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSF1P09603 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms