Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NANOGQ9H9S0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGQ9H9S0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 LINC01960-201ENST00000563759 1884 ntBASIC20.81■□□□□ 0.92
NANOGQ9H9S0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.81■□□□□ 0.92
NANOGQ9H9S0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 MIR4508-201ENST00000584178 70 ntBASIC20.8■□□□□ 0.92
NANOGQ9H9S0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NANOGQ9H9S0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.79■□□□□ 0.92
NANOGQ9H9S0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NANOGQ9H9S0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.79■□□□□ 0.92
NANOGQ9H9S0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NANOGQ9H9S0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.79■□□□□ 0.92
NANOGQ9H9S0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.79■□□□□ 0.92
NANOGQ9H9S0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NANOGQ9H9S0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.79■□□□□ 0.92
NANOGQ9H9S0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NANOGQ9H9S0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGQ9H9S0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NANOGQ9H9S0 TSPY13P-201ENST00000338964 914 ntBASIC20.77■□□□□ 0.92
NANOGQ9H9S0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NANOGQ9H9S0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.77■□□□□ 0.92
NANOGQ9H9S0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.77■□□□□ 0.92
NANOGQ9H9S0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.77■□□□□ 0.92
NANOGQ9H9S0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NANOGQ9H9S0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.77■□□□□ 0.92
NANOGQ9H9S0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NANOGQ9H9S0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.77■□□□□ 0.91
NANOGQ9H9S0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NANOGQ9H9S0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
NANOGQ9H9S0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.76■□□□□ 0.91
NANOGQ9H9S0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.76■□□□□ 0.91
NANOGQ9H9S0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NANOGQ9H9S0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NANOGQ9H9S0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.76■□□□□ 0.91
NANOGQ9H9S0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.76■□□□□ 0.91
NANOGQ9H9S0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NANOGQ9H9S0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.76■□□□□ 0.91
NANOGQ9H9S0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NANOGQ9H9S0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NANOGQ9H9S0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
NANOGQ9H9S0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms