Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC34.64■■■■□ 3.14
PPARGC1BQ86YN6 AC009086.3-201ENST00000623486 1008 ntBASIC34.64■■■■□ 3.14
PPARGC1BQ86YN6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
PPARGC1BQ86YN6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC34.64■■■■□ 3.14
PPARGC1BQ86YN6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC34.64■■■■□ 3.14
PPARGC1BQ86YN6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC34.64■■■■□ 3.14
PPARGC1BQ86YN6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
PPARGC1BQ86YN6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC34.63■■■■□ 3.13
PPARGC1BQ86YN6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC34.63■■■■□ 3.13
PPARGC1BQ86YN6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
PPARGC1BQ86YN6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
PPARGC1BQ86YN6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC34.63■■■■□ 3.13
PPARGC1BQ86YN6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC34.63■■■■□ 3.13
PPARGC1BQ86YN6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC34.63■■■■□ 3.13
PPARGC1BQ86YN6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
PPARGC1BQ86YN6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
PPARGC1BQ86YN6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC34.62■■■■□ 3.13
PPARGC1BQ86YN6 pRNA.6-201ENST00000610482 90 ntBASIC34.62■■■■□ 3.13
PPARGC1BQ86YN6 pRNA.5-201ENST00000612139 90 ntBASIC34.62■■■■□ 3.13
PPARGC1BQ86YN6 pRNA.11-201ENST00000618423 90 ntBASIC34.62■■■■□ 3.13
PPARGC1BQ86YN6 pRNA.13-201ENST00000619112 90 ntBASIC34.62■■■■□ 3.13
PPARGC1BQ86YN6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
PPARGC1BQ86YN6 AC004687.1-201ENST00000579003 1625 ntBASIC34.62■■■■□ 3.13
PPARGC1BQ86YN6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC34.62■■■■□ 3.13
PPARGC1BQ86YN6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC34.61■■■■□ 3.13
PPARGC1BQ86YN6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
PPARGC1BQ86YN6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
PPARGC1BQ86YN6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC34.61■■■■□ 3.13
PPARGC1BQ86YN6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC34.61■■■■□ 3.13
PPARGC1BQ86YN6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
PPARGC1BQ86YN6 SERBP1P1-201ENST00000396021 1160 ntBASIC34.6■■■■□ 3.13
PPARGC1BQ86YN6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC34.6■■■■□ 3.13
PPARGC1BQ86YN6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC34.6■■■■□ 3.13
PPARGC1BQ86YN6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
PPARGC1BQ86YN6 DUX4L4-201ENST00000566884 1269 ntBASIC34.6■■■■□ 3.13
PPARGC1BQ86YN6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC34.6■■■■□ 3.13
PPARGC1BQ86YN6 MIR3181-201ENST00000578512 73 ntBASIC34.6■■■■□ 3.13
PPARGC1BQ86YN6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC34.6■■■■□ 3.13
PPARGC1BQ86YN6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC34.6■■■■□ 3.13
PPARGC1BQ86YN6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC34.59■■■■□ 3.13
PPARGC1BQ86YN6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
PPARGC1BQ86YN6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
PPARGC1BQ86YN6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC34.59■■■■□ 3.13
PPARGC1BQ86YN6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC34.59■■■■□ 3.13
PPARGC1BQ86YN6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
PPARGC1BQ86YN6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC34.59■■■■□ 3.13
PPARGC1BQ86YN6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC34.59■■■■□ 3.13
PPARGC1BQ86YN6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
PPARGC1BQ86YN6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
PPARGC1BQ86YN6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
PPARGC1BQ86YN6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC34.58■■■■□ 3.13
PPARGC1BQ86YN6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
PPARGC1BQ86YN6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC34.58■■■■□ 3.13
PPARGC1BQ86YN6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
PPARGC1BQ86YN6 FP325331.1-202ENST00000623531 1380 ntBASIC34.58■■■■□ 3.13
PPARGC1BQ86YN6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC34.58■■■■□ 3.13
PPARGC1BQ86YN6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC34.57■■■■□ 3.13
PPARGC1BQ86YN6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC34.57■■■■□ 3.13
PPARGC1BQ86YN6 AC096631.2-201ENST00000436136 790 ntBASIC34.57■■■■□ 3.12
PPARGC1BQ86YN6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC34.57■■■■□ 3.12
PPARGC1BQ86YN6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC34.57■■■■□ 3.12
PPARGC1BQ86YN6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC34.56■■■■□ 3.12
PPARGC1BQ86YN6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC34.56■■■■□ 3.12
PPARGC1BQ86YN6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
PPARGC1BQ86YN6 UNC93B3-201ENST00000308076 687 ntBASIC34.56■■■■□ 3.12
PPARGC1BQ86YN6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC34.56■■■■□ 3.12
PPARGC1BQ86YN6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC34.56■■■■□ 3.12
PPARGC1BQ86YN6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC34.56■■■■□ 3.12
PPARGC1BQ86YN6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
PPARGC1BQ86YN6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC34.56■■■■□ 3.12
PPARGC1BQ86YN6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC34.56■■■■□ 3.12
PPARGC1BQ86YN6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
PPARGC1BQ86YN6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
PPARGC1BQ86YN6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC34.54■■■■□ 3.12
PPARGC1BQ86YN6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
PPARGC1BQ86YN6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
PPARGC1BQ86YN6 PTCHD3P2-201ENST00000424937 1205 ntBASIC34.54■■■■□ 3.12
PPARGC1BQ86YN6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
PPARGC1BQ86YN6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC34.54■■■■□ 3.12
PPARGC1BQ86YN6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
PPARGC1BQ86YN6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC34.53■■■■□ 3.12
PPARGC1BQ86YN6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
PPARGC1BQ86YN6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC34.53■■■■□ 3.12
PPARGC1BQ86YN6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
PPARGC1BQ86YN6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
PPARGC1BQ86YN6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
PPARGC1BQ86YN6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC34.52■■■■□ 3.12
PPARGC1BQ86YN6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC34.52■■■■□ 3.12
PPARGC1BQ86YN6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 380.9 ms