Protein–RNA interactions for Protein: P40080

VFA1, VPS4-associated protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VFA1P40080 CUP1-1YHR053C 186 nt4.67□□□□□ -1.66
VFA1P40080 CUP1-2YHR055C 186 nt4.67□□□□□ -1.66
VFA1P40080 BET1YIL004C 429 nt4.67□□□□□ -1.66
VFA1P40080 CDC42YLR229C 576 nt4.67□□□□□ -1.66
VFA1P40080 LIP2YLR239C 987 nt4.67□□□□□ -1.66
VFA1P40080 YBL029C-AYBL029C-A 285 nt4.67□□□□□ -1.66
VFA1P40080 CCS1YMR038C 750 nt4.67□□□□□ -1.66
VFA1P40080 YBL062WYBL062W 381 nt4.67□□□□□ -1.66
VFA1P40080 RGS2YOR107W 930 nt4.67□□□□□ -1.66
VFA1P40080 PNO1YOR145C 825 nt4.67□□□□□ -1.66
VFA1P40080 HAT1YPL001W 1125 nt4.67□□□□□ -1.66
VFA1P40080 TAZ1YPR140W 1146 nt4.67□□□□□ -1.66
VFA1P40080 LDH1YBR204C 1128 nt4.67□□□□□ -1.66
VFA1P40080 SSA2YLL024C 1920 nt4.67□□□□□ -1.66
VFA1P40080 KRS1YDR037W 1776 nt4.67□□□□□ -1.66
VFA1P40080 YEH2YLR020C 1617 nt4.67□□□□□ -1.66
VFA1P40080 POL12YBL035C 2118 nt4.67□□□□□ -1.66
VFA1P40080 XKS1YGR194C 1803 nt4.67□□□□□ -1.66
VFA1P40080 MSA1YOR066W 1890 nt4.66□□□□□ -1.66
VFA1P40080 RFT1YBL020W 1725 nt4.66□□□□□ -1.66
VFA1P40080 AFT1YGL071W 2073 nt4.66□□□□□ -1.66
VFA1P40080 LAS21YJL062W 2493 nt4.66□□□□□ -1.66
VFA1P40080 VHC1YBR235W 3363 nt4.66□□□□□ -1.66
VFA1P40080 MAK11YKL021C 1407 nt4.66□□□□□ -1.66
VFA1P40080 LEU1YGL009C 2340 nt4.66□□□□□ -1.66
VFA1P40080 YDR391CYDR391C 699 nt4.66□□□□□ -1.66
VFA1P40080 RPL34AYER056C-A 366 nt4.66□□□□□ -1.66
VFA1P40080 YFR052C-AYFR052C-A 306 nt4.66□□□□□ -1.66
VFA1P40080 tQ(UUG)CtQ(UUG)C 72 nt4.66□□□□□ -1.66
VFA1P40080 tQ(UUG)D1tQ(UUG)D1 72 nt4.66□□□□□ -1.66
VFA1P40080 tQ(UUG)D2tQ(UUG)D2 72 nt4.66□□□□□ -1.66
VFA1P40080 tQ(UUG)D3tQ(UUG)D3 72 nt4.66□□□□□ -1.66
VFA1P40080 tQ(UUG)E1tQ(UUG)E1 72 nt4.66□□□□□ -1.66
VFA1P40080 tQ(UUG)HtQ(UUG)H 72 nt4.66□□□□□ -1.66
VFA1P40080 tQ(UUG)LtQ(UUG)L 72 nt4.66□□□□□ -1.66
VFA1P40080 RAD27YKL113C 1149 nt4.66□□□□□ -1.66
VFA1P40080 JHD2YJR119C 2187 nt4.65□□□□□ -1.66
VFA1P40080 KIN28YDL108W 921 nt4.65□□□□□ -1.67
VFA1P40080 RDI1YDL135C 609 nt4.65□□□□□ -1.67
VFA1P40080 PEX14YGL153W 1026 nt4.65□□□□□ -1.67
VFA1P40080 YIL025CYIL025C 375 nt4.65□□□□□ -1.67
VFA1P40080 SDS3YIL084C 984 nt4.65□□□□□ -1.67
VFA1P40080 YIL171W-AYIL171W-A 453 nt4.65□□□□□ -1.67
VFA1P40080 YJL220WYJL220W 453 nt4.65□□□□□ -1.67
VFA1P40080 YLR407WYLR407W 687 nt4.65□□□□□ -1.67
VFA1P40080 PRX1YBL064C 786 nt4.65□□□□□ -1.67
VFA1P40080 WRS1YOL097C 1299 nt4.65□□□□□ -1.67
VFA1P40080 snR189snR189 189 nt4.65□□□□□ -1.67
VFA1P40080 SSH4YKL124W 1740 nt4.65□□□□□ -1.67
VFA1P40080 ECM18YDR125C 1362 nt4.65□□□□□ -1.67
VFA1P40080 IOC4YMR044W 1428 nt4.64□□□□□ -1.67
VFA1P40080 VBA2YBR293W 1425 nt4.64□□□□□ -1.67
VFA1P40080 SLS1YLR139C 1932 nt4.64□□□□□ -1.67
VFA1P40080 RCM1YNL022C 1473 nt4.64□□□□□ -1.67
VFA1P40080 snR7-LsnR7-L 214 nt4.64□□□□□ -1.67
VFA1P40080 NUS1YDL193W 1128 nt4.64□□□□□ -1.67
VFA1P40080 THI13YDL244W 1023 nt4.64□□□□□ -1.67
VFA1P40080 CPR1YDR155C 489 nt4.64□□□□□ -1.67
VFA1P40080 YER084WYER084W 387 nt4.64□□□□□ -1.67
VFA1P40080 YGR270C-AYGR270C-A 219 nt4.64□□□□□ -1.67
VFA1P40080 THI11YJR156C 1023 nt4.64□□□□□ -1.67
VFA1P40080 YPL025CYPL025C 558 nt4.64□□□□□ -1.67
VFA1P40080 ICY2YPL250C 411 nt4.64□□□□□ -1.67
VFA1P40080 SPP381YBR152W 876 nt4.64□□□□□ -1.67
VFA1P40080 RPS9BYBR189W 588 nt4.64□□□□□ -1.67
VFA1P40080 CDC15YAR019C 2925 nt4.64□□□□□ -1.67
VFA1P40080 SNF3YDL194W 2655 nt4.63□□□□□ -1.67
VFA1P40080 YCL068CYCL068C 783 nt4.63□□□□□ -1.67
VFA1P40080 TFB3YDR460W 966 nt4.63□□□□□ -1.67
VFA1P40080 YFR032C-BYFR032C-B 264 nt4.63□□□□□ -1.67
VFA1P40080 YGL177WYGL177W 348 nt4.63□□□□□ -1.67
VFA1P40080 CMC1YKL137W 336 nt4.63□□□□□ -1.67
VFA1P40080 PER33YLR064W 822 nt4.63□□□□□ -1.67
VFA1P40080 GSP1YLR293C 660 nt4.63□□□□□ -1.67
VFA1P40080 YBL059WYBL059W 582 nt4.63□□□□□ -1.67
VFA1P40080 YOR314WYOR314W 330 nt4.63□□□□□ -1.67
VFA1P40080 ARA1YBR149W 1035 nt4.63□□□□□ -1.67
VFA1P40080 RKM2YDR198C 1440 nt4.63□□□□□ -1.67
VFA1P40080 MIH1YMR036C 1665 nt4.62□□□□□ -1.67
VFA1P40080 RKM3YBR030W 1659 nt4.62□□□□□ -1.67
VFA1P40080 YCL076WYCL076W 744 nt4.62□□□□□ -1.67
VFA1P40080 YCR050CYCR050C 309 nt4.62□□□□□ -1.67
VFA1P40080 YDR509WYDR509W 348 nt4.62□□□□□ -1.67
VFA1P40080 LYS5YGL154C 819 nt4.62□□□□□ -1.67
VFA1P40080 TYS1YGR185C 1185 nt4.62□□□□□ -1.67
VFA1P40080 MRPS17YMR188C 714 nt4.62□□□□□ -1.67
VFA1P40080 NRM1YNR009W 750 nt4.62□□□□□ -1.67
VFA1P40080 RCL1YOL010W 1104 nt4.62□□□□□ -1.67
VFA1P40080 SUL2YLR092W 2682 nt4.62□□□□□ -1.67
VFA1P40080 UPC2YDR213W 2742 nt4.62□□□□□ -1.67
VFA1P40080 ENT1YDL161W 1365 nt4.62□□□□□ -1.67
VFA1P40080 KIC1YHR102W 3243 nt4.62□□□□□ -1.67
VFA1P40080 MBP1YDL056W 2502 nt4.62□□□□□ -1.67
VFA1P40080 TDA3YHR009C 1572 nt4.61□□□□□ -1.67
VFA1P40080 MEF2YJL102W 2460 nt4.61□□□□□ -1.67
VFA1P40080 YJL218WYJL218W 591 nt4.61□□□□□ -1.67
VFA1P40080 YLR125WYLR125W 411 nt4.61□□□□□ -1.67
VFA1P40080 SEC72YLR292C 582 nt4.61□□□□□ -1.67
VFA1P40080 FYV6YNL133C 522 nt4.61□□□□□ -1.67
VFA1P40080 YNL144W-AYNL144W-A 84 nt4.61□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 29.3 ms