Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 CAF4YKR036C 1932 nt4.36□□□□□ -1.71
TY2A-FP0CX61 TAF5YBR198C 2397 nt4.36□□□□□ -1.71
TY2A-FP0CX61 RAD28YDR030C 1521 nt4.36□□□□□ -1.71
TY2A-FP0CX61 CLF1YLR117C 2064 nt4.36□□□□□ -1.71
TY2A-FP0CX61 HAP4YKL109W 1665 nt4.36□□□□□ -1.71
TY2A-FP0CX61 KRE6YPR159W 2163 nt4.36□□□□□ -1.71
TY2A-FP0CX61 YCR007CYCR007C 720 nt4.36□□□□□ -1.71
TY2A-FP0CX61 CPR4YCR069W 957 nt4.36□□□□□ -1.71
TY2A-FP0CX61 ENT5YDR153C 1236 nt4.36□□□□□ -1.71
TY2A-FP0CX61 YFR032C-BYFR032C-B 264 nt4.36□□□□□ -1.71
TY2A-FP0CX61 GEP7YGL057C 864 nt4.36□□□□□ -1.71
TY2A-FP0CX61 TOS8YGL096W 831 nt4.36□□□□□ -1.71
TY2A-FP0CX61 YGL177WYGL177W 348 nt4.36□□□□□ -1.71
TY2A-FP0CX61 COS12YGL263W 1143 nt4.36□□□□□ -1.71
TY2A-FP0CX61 ECT1YGR007W 972 nt4.36□□□□□ -1.71
TY2A-FP0CX61 PRE9YGR135W 777 nt4.36□□□□□ -1.71
TY2A-FP0CX61 YLR366WYLR366W 306 nt4.36□□□□□ -1.71
TY2A-FP0CX61 CUZ1YNL155W 825 nt4.36□□□□□ -1.71
TY2A-FP0CX61 PLP2YOR281C 861 nt4.36□□□□□ -1.71
TY2A-FP0CX61 SPO19YPL130W 672 nt4.36□□□□□ -1.71
TY2A-FP0CX61 KTR6YPL053C 1341 nt4.36□□□□□ -1.71
TY2A-FP0CX61 PBI1YPL272C 1554 nt4.36□□□□□ -1.71
TY2A-FP0CX61 MPS3YJL019W 2049 nt4.35□□□□□ -1.71
TY2A-FP0CX61 PHO13YDL236W 939 nt4.35□□□□□ -1.71
TY2A-FP0CX61 NBP2YDR162C 711 nt4.35□□□□□ -1.71
TY2A-FP0CX61 YGR270C-AYGR270C-A 219 nt4.35□□□□□ -1.71
TY2A-FP0CX61 COS8YHL048W 1146 nt4.35□□□□□ -1.71
TY2A-FP0CX61 YAL016C-BYAL016C-B 186 nt4.35□□□□□ -1.71
TY2A-FP0CX61 RIF2YLR453C 1188 nt4.35□□□□□ -1.71
TY2A-FP0CX61 PNO1YOR145C 825 nt4.35□□□□□ -1.71
TY2A-FP0CX61 OPY1YBR129C 987 nt4.35□□□□□ -1.71
TY2A-FP0CX61 UMP1YBR173C 447 nt4.35□□□□□ -1.71
TY2A-FP0CX61 APA1YCL050C 966 nt4.35□□□□□ -1.71
TY2A-FP0CX61 CLG1YGL215W 1359 nt4.35□□□□□ -1.71
TY2A-FP0CX61 MAK11YKL021C 1407 nt4.35□□□□□ -1.71
TY2A-FP0CX61 AKL1YBR059C 3327 nt4.35□□□□□ -1.71
TY2A-FP0CX61 YFL040WYFL040W 1623 nt4.35□□□□□ -1.71
TY2A-FP0CX61 THI7YLR237W 1797 nt4.35□□□□□ -1.71
TY2A-FP0CX61 PDR15YDR406W 4590 nt4.34□□□□□ -1.71
TY2A-FP0CX61 FAA3YIL009W 2085 nt4.34□□□□□ -1.71
TY2A-FP0CX61 FMC1YIL098C 468 nt4.34□□□□□ -1.71
TY2A-FP0CX61 KTR2YKR061W 1278 nt4.34□□□□□ -1.71
TY2A-FP0CX61 YAR023CYAR023C 540 nt4.34□□□□□ -1.71
TY2A-FP0CX61 YPR074W-AYPR074W-A 171 nt4.34□□□□□ -1.71
TY2A-FP0CX61 SPS2YDR522C 1509 nt4.34□□□□□ -1.71
TY2A-FP0CX61 MAL12YGR292W 1755 nt4.33□□□□□ -1.72
TY2A-FP0CX61 MAL32YBR299W 1755 nt4.33□□□□□ -1.72
TY2A-FP0CX61 PUT2YHR037W 1728 nt4.33□□□□□ -1.72
TY2A-FP0CX61 ALG6YOR002W 1635 nt4.33□□□□□ -1.72
TY2A-FP0CX61 STP4YDL048C 1473 nt4.33□□□□□ -1.72
TY2A-FP0CX61 RTC1YOL138C 4026 nt4.33□□□□□ -1.72
TY2A-FP0CX61 HNT2YDR305C 654 nt4.33□□□□□ -1.72
TY2A-FP0CX61 SNA2YDR525W-A 240 nt4.33□□□□□ -1.72
TY2A-FP0CX61 MPS2YGL075C 1164 nt4.33□□□□□ -1.72
TY2A-FP0CX61 YGL218WYGL218W 651 nt4.33□□□□□ -1.72
TY2A-FP0CX61 PER33YLR064W 822 nt4.33□□□□□ -1.72
TY2A-FP0CX61 NMA1YLR328W 1206 nt4.33□□□□□ -1.72
TY2A-FP0CX61 MRP21YBL090W 534 nt4.33□□□□□ -1.72
TY2A-FP0CX61 REX4YOL080C 870 nt4.33□□□□□ -1.72
TY2A-FP0CX61 ATG5YPL149W 885 nt4.33□□□□□ -1.72
TY2A-FP0CX61 ICS2YBR157C 768 nt4.33□□□□□ -1.72
TY2A-FP0CX61 TGL4YKR089C 2733 nt4.33□□□□□ -1.72
TY2A-FP0CX61 UGA3YDL170W 1587 nt4.32□□□□□ -1.72
TY2A-FP0CX61 EUG1YDR518W 1554 nt4.32□□□□□ -1.72
TY2A-FP0CX61 SYF1YDR416W 2580 nt4.32□□□□□ -1.72
TY2A-FP0CX61 IDS2YJL146W 1410 nt4.32□□□□□ -1.72
TY2A-FP0CX61 RPL35BYDL136W 363 nt4.32□□□□□ -1.72
TY2A-FP0CX61 RPS11AYDR025W 471 nt4.32□□□□□ -1.72
TY2A-FP0CX61 YIL171W-AYIL171W-A 453 nt4.32□□□□□ -1.72
TY2A-FP0CX61 YJL220WYJL220W 453 nt4.32□□□□□ -1.72
TY2A-FP0CX61 GSP1YLR293C 660 nt4.32□□□□□ -1.72
TY2A-FP0CX61 RRN9YMR270C 1098 nt4.32□□□□□ -1.72
TY2A-FP0CX61 FYV6YNL133C 522 nt4.32□□□□□ -1.72
TY2A-FP0CX61 VPS69YPR087W 321 nt4.32□□□□□ -1.72
TY2A-FP0CX61 SLM4YBR077C 489 nt4.32□□□□□ -1.72
TY2A-FP0CX61 snR37snR37 386 nt4.32□□□□□ -1.72
TY2A-FP0CX61 RER1YCL001W 567 nt4.32□□□□□ -1.72
TY2A-FP0CX61 YGR125WYGR125W 3111 nt4.31□□□□□ -1.72
TY2A-FP0CX61 TFC7YOR110W 1308 nt4.31□□□□□ -1.72
TY2A-FP0CX61 CPR1YDR155C 489 nt4.31□□□□□ -1.72
TY2A-FP0CX61 ARG82YDR173C 1068 nt4.31□□□□□ -1.72
TY2A-FP0CX61 HIM1YDR317W 1245 nt4.31□□□□□ -1.72
TY2A-FP0CX61 CUP1-1YHR053C 186 nt4.31□□□□□ -1.72
TY2A-FP0CX61 CUP1-2YHR055C 186 nt4.31□□□□□ -1.72
TY2A-FP0CX61 HTD2YHR067W 843 nt4.31□□□□□ -1.72
TY2A-FP0CX61 COA3YJL062W-A 258 nt4.31□□□□□ -1.72
TY2A-FP0CX61 POL32YJR043C 1053 nt4.31□□□□□ -1.72
TY2A-FP0CX61 HTA2YBL003C 399 nt4.31□□□□□ -1.72
TY2A-FP0CX61 IMP2YMR035W 534 nt4.31□□□□□ -1.72
TY2A-FP0CX61 MCM1YMR043W 861 nt4.31□□□□□ -1.72
TY2A-FP0CX61 BUD17YNR027W 954 nt4.31□□□□□ -1.72
TY2A-FP0CX61 ATG34YOL083W 1239 nt4.31□□□□□ -1.72
TY2A-FP0CX61 CIN5YOR028C 888 nt4.31□□□□□ -1.72
TY2A-FP0CX61 OXR1YPL196W 822 nt4.31□□□□□ -1.72
TY2A-FP0CX61 CPS1YJL172W 1731 nt4.31□□□□□ -1.72
TY2A-FP0CX61 TPS3YMR261C 3165 nt4.31□□□□□ -1.72
TY2A-FP0CX61 MSC2YDR205W 2175 nt4.31□□□□□ -1.72
TY2A-FP0CX61 SMP3YOR149C 1551 nt4.31□□□□□ -1.72
TY2A-FP0CX61 CTR86YCR054C 1692 nt4.3□□□□□ -1.72
TY2A-FP0CX61 BLM10YFL007W 6432 nt4.3□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms