Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIMC1Q8NDZ2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIMC1Q8NDZ2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIMC1Q8NDZ2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.74■□□□□ 0.91
SIMC1Q8NDZ2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.74■□□□□ 0.91
SIMC1Q8NDZ2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIMC1Q8NDZ2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 MIR935-201ENST00000401179 91 ntBASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SIMC1Q8NDZ2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 SRD5A1P1-201ENST00000442297 786 ntBASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.72■□□□□ 0.91
SIMC1Q8NDZ2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 AL136116.3-201ENST00000402907 1138 ntBASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIMC1Q8NDZ2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.7■□□□□ 0.91
SIMC1Q8NDZ2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 AC009086.3-201ENST00000623486 1008 ntBASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIMC1Q8NDZ2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
SIMC1Q8NDZ2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIMC1Q8NDZ2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.69■□□□□ 0.9
SIMC1Q8NDZ2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIMC1Q8NDZ2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 AC004687.1-201ENST00000579003 1625 ntBASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 AC241377.3-202ENST00000626088 1088 ntBASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 AC241585.3-202ENST00000628937 1088 ntBASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 AC245100.8-202ENST00000629247 1058 ntBASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIMC1Q8NDZ2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 pRNA.6-201ENST00000610482 90 ntBASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 pRNA.5-201ENST00000612139 90 ntBASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 pRNA.11-201ENST00000618423 90 ntBASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 pRNA.13-201ENST00000619112 90 ntBASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIMC1Q8NDZ2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 AL499627.2-201ENST00000606283 725 ntBASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms