Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.88■■□□□ 1.09
PCDH15Q96QU1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH15Q96QU1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH15Q96QU1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDH15Q96QU1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH15Q96QU1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH15Q96QU1 ABHD17AP1-201ENST00000358206 933 ntBASIC21.87■■□□□ 1.09
PCDH15Q96QU1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH15Q96QU1 AC104771.1-201ENST00000603335 964 ntBASIC21.87■■□□□ 1.09
PCDH15Q96QU1 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.87■■□□□ 1.09
PCDH15Q96QU1 AC105233.4-201ENST00000642045 216 ntBASIC21.87■■□□□ 1.09
PCDH15Q96QU1 FP325331.1-202ENST00000623531 1380 ntBASIC21.87■■□□□ 1.09
PCDH15Q96QU1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PCDH15Q96QU1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH15Q96QU1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDH15Q96QU1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDH15Q96QU1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PCDH15Q96QU1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH15Q96QU1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDH15Q96QU1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH15Q96QU1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDH15Q96QU1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDH15Q96QU1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PCDH15Q96QU1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 DUX4L4-201ENST00000566884 1269 ntBASIC21.85■■□□□ 1.09
PCDH15Q96QU1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.85■■□□□ 1.09
PCDH15Q96QU1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 AC026185.1-201ENST00000445748 174 ntBASIC21.85■■□□□ 1.09
PCDH15Q96QU1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDH15Q96QU1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDH15Q96QU1 AP003733.4-201ENST00000623785 1697 ntBASIC21.84■■□□□ 1.09
PCDH15Q96QU1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH15Q96QU1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
PCDH15Q96QU1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDH15Q96QU1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH15Q96QU1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH15Q96QU1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH15Q96QU1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
PCDH15Q96QU1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH15Q96QU1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH15Q96QU1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDH15Q96QU1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDH15Q96QU1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
PCDH15Q96QU1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH15Q96QU1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH15Q96QU1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDH15Q96QU1 AP004607.4-201ENST00000530158 1459 ntBASIC21.82■■□□□ 1.08
PCDH15Q96QU1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDH15Q96QU1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDH15Q96QU1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH15Q96QU1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PCDH15Q96QU1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDH15Q96QU1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH15Q96QU1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH15Q96QU1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH15Q96QU1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.81■■□□□ 1.08
PCDH15Q96QU1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PCDH15Q96QU1 AC004854.2-201ENST00000608450 1441 ntBASIC21.81■■□□□ 1.08
PCDH15Q96QU1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH15Q96QU1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH15Q96QU1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDH15Q96QU1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH15Q96QU1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH15Q96QU1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH15Q96QU1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH15Q96QU1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH15Q96QU1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 CROCCP5-201ENST00000436658 830 ntBASIC21.79■■□□□ 1.08
PCDH15Q96QU1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 AC144652.1-201ENST00000609974 1624 ntBASIC21.79■■□□□ 1.08
PCDH15Q96QU1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 MIR663A-201ENST00000385250 93 ntBASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms