Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF20Q53R12 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.15■□□□□ 0.34
TM4SF20Q53R12 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF20Q53R12 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TM4SF20Q53R12 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.15■□□□□ 0.34
TM4SF20Q53R12 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TM4SF20Q53R12 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.15■□□□□ 0.34
TM4SF20Q53R12 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TM4SF20Q53R12 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF20Q53R12 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TM4SF20Q53R12 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.14■□□□□ 0.33
TM4SF20Q53R12 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF20Q53R12 AC092068.2-201ENST00000590491 1708 ntBASIC17.13■□□□□ 0.33
TM4SF20Q53R12 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF20Q53R12 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TM4SF20Q53R12 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF20Q53R12 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF20Q53R12 DUSP8P5-201ENST00000422884 1815 ntBASIC17.12■□□□□ 0.33
TM4SF20Q53R12 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.12■□□□□ 0.33
TM4SF20Q53R12 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF20Q53R12 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.12■□□□□ 0.33
TM4SF20Q53R12 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.12■□□□□ 0.33
TM4SF20Q53R12 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF20Q53R12 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.11■□□□□ 0.33
TM4SF20Q53R12 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF20Q53R12 AC144652.1-201ENST00000609974 1624 ntBASIC17.1■□□□□ 0.33
TM4SF20Q53R12 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 C17orf82-201ENST00000623772 1530 ntBASIC17.1■□□□□ 0.33
TM4SF20Q53R12 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF20Q53R12 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms