Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PARPBPQ9NWS1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.79■□□□□ 0.76
PARPBPQ9NWS1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PARPBPQ9NWS1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PARPBPQ9NWS1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PARPBPQ9NWS1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PARPBPQ9NWS1 AL353803.4-201ENST00000565882 1934 ntBASIC19.77■□□□□ 0.76
PARPBPQ9NWS1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PARPBPQ9NWS1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PARPBPQ9NWS1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.77■□□□□ 0.76
PARPBPQ9NWS1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.77■□□□□ 0.76
PARPBPQ9NWS1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
PARPBPQ9NWS1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PARPBPQ9NWS1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PARPBPQ9NWS1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PARPBPQ9NWS1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 UNC93B3-201ENST00000308076 687 ntBASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PARPBPQ9NWS1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 AC096631.2-201ENST00000436136 790 ntBASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 AL499627.2-201ENST00000606283 725 ntBASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 pRNA.6-201ENST00000610482 90 ntBASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 pRNA.5-201ENST00000612139 90 ntBASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 pRNA.11-201ENST00000618423 90 ntBASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 pRNA.13-201ENST00000619112 90 ntBASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PARPBPQ9NWS1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 AC006455.2-201ENST00000429931 906 ntBASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 MIR3181-201ENST00000578512 73 ntBASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 AC011298.3-201ENST00000615796 283 ntBASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms