Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.99■□□□□ 0.63
LIN54Q6MZP7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIN54Q6MZP7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
LIN54Q6MZP7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LIN54Q6MZP7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.98■□□□□ 0.63
LIN54Q6MZP7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIN54Q6MZP7 MIR6765-201ENST00000614092 87 ntBASIC18.98■□□□□ 0.63
LIN54Q6MZP7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LIN54Q6MZP7 AC129492.7-201ENST00000622992 756 ntBASIC18.98■□□□□ 0.63
LIN54Q6MZP7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LIN54Q6MZP7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 AL121603.2-201ENST00000557373 2117 ntBASIC18.97■□□□□ 0.63
LIN54Q6MZP7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.97■□□□□ 0.63
LIN54Q6MZP7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 DUX4L9-201ENST00000449051 1259 ntBASIC18.96■□□□□ 0.63
LIN54Q6MZP7 SPCS2P3-201ENST00000500401 656 ntBASIC18.96■□□□□ 0.63
LIN54Q6MZP7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 AC138932.1-201ENST00000534164 6830 ntBASIC18.96■□□□□ 0.63
LIN54Q6MZP7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN54Q6MZP7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.95■□□□□ 0.62
LIN54Q6MZP7 SLC25A24-204ENST00000569674 2357 ntBASIC18.95■□□□□ 0.62
LIN54Q6MZP7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN54Q6MZP7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.94■□□□□ 0.62
LIN54Q6MZP7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN54Q6MZP7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.94■□□□□ 0.62
LIN54Q6MZP7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN54Q6MZP7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN54Q6MZP7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN54Q6MZP7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN54Q6MZP7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LIN54Q6MZP7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.92■□□□□ 0.62
LIN54Q6MZP7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIN54Q6MZP7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.91■□□□□ 0.62
LIN54Q6MZP7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LIN54Q6MZP7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LIN54Q6MZP7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LIN54Q6MZP7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIN54Q6MZP7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIN54Q6MZP7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms