Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LINC01555Q8NAE3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LINC01555Q8NAE3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 pRNA.6-201ENST00000610482 90 ntBASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 pRNA.5-201ENST00000612139 90 ntBASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 pRNA.11-201ENST00000618423 90 ntBASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 pRNA.13-201ENST00000619112 90 ntBASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC01555Q8NAE3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 AL139246.5-201ENST00000606645 996 ntBASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 AL136162.1-201ENST00000607711 1078 ntBASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC01555Q8NAE3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 AL499627.2-201ENST00000606283 725 ntBASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LINC01555Q8NAE3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.54■■□□□ 1.04
LINC01555Q8NAE3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
LINC01555Q8NAE3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LINC01555Q8NAE3 AC024257.2-201ENST00000549699 147 ntBASIC21.54■■□□□ 1.04
LINC01555Q8NAE3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC01555Q8NAE3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 AL138724.1-201ENST00000606771 1088 ntBASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 DUSP8P3-201ENST00000399571 1760 ntBASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 AC135279.3-201ENST00000610945 1311 ntBASIC21.53■■□□□ 1.04
LINC01555Q8NAE3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 PBX2P1-201ENST00000493219 1291 ntBASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 AC106739.1-201ENST00000617035 715 ntBASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.52■■□□□ 1.04
LINC01555Q8NAE3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.52■■□□□ 1.03
LINC01555Q8NAE3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
LINC01555Q8NAE3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
LINC01555Q8NAE3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.52■■□□□ 1.03
LINC01555Q8NAE3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 AC011298.3-201ENST00000615796 283 ntBASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
LINC01555Q8NAE3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms