Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC9CQ8N5M4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 AC009102.2-201ENST00000606772 1639 ntBASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC9CQ8N5M4 LINC01529-204ENST00000636474 1715 ntBASIC17.58■□□□□ 0.41
TTC9CQ8N5M4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TTC9CQ8N5M4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TTC9CQ8N5M4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TTC9CQ8N5M4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC9CQ8N5M4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.58■□□□□ 0.4
TTC9CQ8N5M4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
TTC9CQ8N5M4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.58■□□□□ 0.4
TTC9CQ8N5M4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC9CQ8N5M4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC9CQ8N5M4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TTC9CQ8N5M4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TTC9CQ8N5M4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TTC9CQ8N5M4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 C9orf163-202ENST00000624034 2573 ntBASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.56■□□□□ 0.4
TTC9CQ8N5M4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 DUX4L4-201ENST00000566884 1269 ntBASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.55■□□□□ 0.4
TTC9CQ8N5M4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC9CQ8N5M4 C17orf82-201ENST00000623772 1530 ntBASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 AL356740.2-201ENST00000601559 647 ntBASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms