Protein–RNA interactions for Protein: P82673

MRPS35, 28S ribosomal protein S35, mitochondrial, humanhuman

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35P82673 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.77■■□□□ 1.08
MRPS35P82673 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
MRPS35P82673 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.77■■□□□ 1.08
MRPS35P82673 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MRPS35P82673 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.77■■□□□ 1.08
MRPS35P82673 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
MRPS35P82673 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
MRPS35P82673 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
MRPS35P82673 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MRPS35P82673 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
MRPS35P82673 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MRPS35P82673 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MRPS35P82673 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
MRPS35P82673 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MRPS35P82673 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MRPS35P82673 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MRPS35P82673 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
MRPS35P82673 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
MRPS35P82673 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MRPS35P82673 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
MRPS35P82673 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MRPS35P82673 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.75■■□□□ 1.07
MRPS35P82673 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MRPS35P82673 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.75■■□□□ 1.07
MRPS35P82673 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MRPS35P82673 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MRPS35P82673 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MRPS35P82673 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MRPS35P82673 AC120024.1-201ENST00000562672 995 ntBASIC21.75■■□□□ 1.07
MRPS35P82673 MIR4508-201ENST00000584178 70 ntBASIC21.75■■□□□ 1.07
MRPS35P82673 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MRPS35P82673 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MRPS35P82673 AC011551.1-201ENST00000614101 683 ntBASIC21.75■■□□□ 1.07
MRPS35P82673 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.75■■□□□ 1.07
MRPS35P82673 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.75■■□□□ 1.07
MRPS35P82673 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
MRPS35P82673 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MRPS35P82673 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
MRPS35P82673 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MRPS35P82673 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.74■■□□□ 1.07
MRPS35P82673 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MRPS35P82673 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MRPS35P82673 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
MRPS35P82673 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MRPS35P82673 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
MRPS35P82673 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
MRPS35P82673 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MRPS35P82673 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.73■■□□□ 1.07
MRPS35P82673 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MRPS35P82673 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPS35P82673 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPS35P82673 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPS35P82673 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
MRPS35P82673 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPS35P82673 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPS35P82673 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPS35P82673 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPS35P82673 YBX1P4-201ENST00000392794 808 ntBASIC21.72■■□□□ 1.07
MRPS35P82673 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.72■■□□□ 1.07
MRPS35P82673 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.72■■□□□ 1.07
MRPS35P82673 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.72■■□□□ 1.07
MRPS35P82673 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.72■■□□□ 1.07
MRPS35P82673 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPS35P82673 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRPS35P82673 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MRPS35P82673 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.72■■□□□ 1.07
MRPS35P82673 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRPS35P82673 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPS35P82673 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MRPS35P82673 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRPS35P82673 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRPS35P82673 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.71■■□□□ 1.07
MRPS35P82673 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRPS35P82673 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
MRPS35P82673 THA1P-201ENST00000590384 1145 ntBASIC21.71■■□□□ 1.07
MRPS35P82673 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRPS35P82673 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MRPS35P82673 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRPS35P82673 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
MRPS35P82673 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
MRPS35P82673 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
MRPS35P82673 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRPS35P82673 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
MRPS35P82673 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MRPS35P82673 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
MRPS35P82673 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MRPS35P82673 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MRPS35P82673 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MRPS35P82673 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MRPS35P82673 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.7■■□□□ 1.06
MRPS35P82673 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
MRPS35P82673 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.69■■□□□ 1.06
MRPS35P82673 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MRPS35P82673 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
MRPS35P82673 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.69■■□□□ 1.06
MRPS35P82673 KRT18P24-201ENST00000344739 1156 ntBASIC21.69■■□□□ 1.06
MRPS35P82673 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MRPS35P82673 AC103724.3-201ENST00000564481 992 ntBASIC21.69■■□□□ 1.06
MRPS35P82673 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MRPS35P82673 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms