Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.54■□□□□ 0.88
PTCHD4Q6ZW05 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTCHD4Q6ZW05 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTCHD4Q6ZW05 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.54■□□□□ 0.88
PTCHD4Q6ZW05 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PTCHD4Q6ZW05 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
PTCHD4Q6ZW05 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 AL022069.1-201ENST00000568025 1636 ntBASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCHD4Q6ZW05 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTCHD4Q6ZW05 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCHD4Q6ZW05 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.52■□□□□ 0.88
PTCHD4Q6ZW05 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCHD4Q6ZW05 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCHD4Q6ZW05 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PTCHD4Q6ZW05 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCHD4Q6ZW05 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.52■□□□□ 0.88
PTCHD4Q6ZW05 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCHD4Q6ZW05 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.52■□□□□ 0.88
PTCHD4Q6ZW05 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCHD4Q6ZW05 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PTCHD4Q6ZW05 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTCHD4Q6ZW05 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 AC139795.1-202ENST00000500444 432 ntBASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 AC019171.1-201ENST00000601251 1056 ntBASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
PTCHD4Q6ZW05 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 AC011551.1-201ENST00000614101 683 ntBASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.5■□□□□ 0.87
PTCHD4Q6ZW05 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PTCHD4Q6ZW05 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCHD4Q6ZW05 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.49■□□□□ 0.87
PTCHD4Q6ZW05 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCHD4Q6ZW05 AC242852.2-201ENST00000615738 1807 ntBASIC20.49■□□□□ 0.87
PTCHD4Q6ZW05 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTCHD4Q6ZW05 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.49■□□□□ 0.87
PTCHD4Q6ZW05 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
PTCHD4Q6ZW05 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCHD4Q6ZW05 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.49■□□□□ 0.87
PTCHD4Q6ZW05 ESRRAP2-201ENST00000418437 1549 ntBASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 AC004987.1-201ENST00000428627 508 ntBASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCHD4Q6ZW05 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.47■□□□□ 0.87
PTCHD4Q6ZW05 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCHD4Q6ZW05 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.47■□□□□ 0.87
PTCHD4Q6ZW05 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCHD4Q6ZW05 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.47■□□□□ 0.87
PTCHD4Q6ZW05 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PTCHD4Q6ZW05 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.47■□□□□ 0.87
PTCHD4Q6ZW05 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCHD4Q6ZW05 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PTCHD4Q6ZW05 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCHD4Q6ZW05 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCHD4Q6ZW05 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCHD4Q6ZW05 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.46■□□□□ 0.87
PTCHD4Q6ZW05 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PTCHD4Q6ZW05 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCHD4Q6ZW05 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCHD4Q6ZW05 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms