Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDH1Q08174 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDH1Q08174 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH1Q08174 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDH1Q08174 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
PCDH1Q08174 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDH1Q08174 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDH1Q08174 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH1Q08174 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH1Q08174 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH1Q08174 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH1Q08174 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH1Q08174 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDH1Q08174 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDH1Q08174 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH1Q08174 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDH1Q08174 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.6■■□□□ 1.05
PCDH1Q08174 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDH1Q08174 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDH1Q08174 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDH1Q08174 AL035685.1-201ENST00000636663 812 ntBASIC21.6■■□□□ 1.05
PCDH1Q08174 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH1Q08174 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDH1Q08174 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDH1Q08174 AL353803.4-201ENST00000565882 1934 ntBASIC21.59■■□□□ 1.05
PCDH1Q08174 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDH1Q08174 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDH1Q08174 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH1Q08174 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH1Q08174 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH1Q08174 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH1Q08174 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH1Q08174 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDH1Q08174 UNC93B8-201ENST00000511903 705 ntBASIC21.58■■□□□ 1.05
PCDH1Q08174 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDH1Q08174 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH1Q08174 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH1Q08174 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH1Q08174 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
PCDH1Q08174 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH1Q08174 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH1Q08174 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PCDH1Q08174 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH1Q08174 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
PCDH1Q08174 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDH1Q08174 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH1Q08174 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH1Q08174 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH1Q08174 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH1Q08174 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDH1Q08174 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH1Q08174 MIR6724-1-201ENST00000616420 92 ntBASIC21.56■■□□□ 1.04
PCDH1Q08174 MIR6724-2-201ENST00000616483 92 ntBASIC21.56■■□□□ 1.04
PCDH1Q08174 MIR6724-4-201ENST00000617390 92 ntBASIC21.56■■□□□ 1.04
PCDH1Q08174 MIR6724-3-201ENST00000622482 92 ntBASIC21.56■■□□□ 1.04
PCDH1Q08174 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PCDH1Q08174 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH1Q08174 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH1Q08174 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PCDH1Q08174 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH1Q08174 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PCDH1Q08174 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDH1Q08174 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PCDH1Q08174 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH1Q08174 AC009102.2-201ENST00000606772 1639 ntBASIC21.55■■□□□ 1.04
PCDH1Q08174 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH1Q08174 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH1Q08174 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
PCDH1Q08174 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH1Q08174 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
PCDH1Q08174 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH1Q08174 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH1Q08174 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH1Q08174 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH1Q08174 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PCDH1Q08174 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH1Q08174 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH1Q08174 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH1Q08174 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PCDH1Q08174 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH1Q08174 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDH1Q08174 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH1Q08174 DUX4L4-201ENST00000566884 1269 ntBASIC21.54■■□□□ 1.04
PCDH1Q08174 C9orf163-202ENST00000624034 2573 ntBASIC21.54■■□□□ 1.04
PCDH1Q08174 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH1Q08174 LINC01529-204ENST00000636474 1715 ntBASIC21.54■■□□□ 1.04
PCDH1Q08174 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH1Q08174 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH1Q08174 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH1Q08174 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH1Q08174 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PCDH1Q08174 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH1Q08174 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH1Q08174 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
PCDH1Q08174 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PCDH1Q08174 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH1Q08174 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH1Q08174 TSPY9P-201ENST00000440215 945 ntBASIC21.53■■□□□ 1.04
PCDH1Q08174 TSPY11P-201ENST00000442607 1045 ntBASIC21.53■■□□□ 1.04
PCDH1Q08174 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms