Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNAI2O43623 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNAI2O43623 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNAI2O43623 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNAI2O43623 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNAI2O43623 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNAI2O43623 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNAI2O43623 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNAI2O43623 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.64■□□□□ 0.25
SNAI2O43623 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNAI2O43623 AC127496.7-201ENST00000625110 1798 ntBASIC16.64■□□□□ 0.25
SNAI2O43623 AL137060.1-201ENST00000618151 2648 ntBASIC16.64■□□□□ 0.25
SNAI2O43623 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNAI2O43623 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNAI2O43623 ECEL1P1-201ENST00000373592 1742 ntBASIC16.63■□□□□ 0.25
SNAI2O43623 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.63■□□□□ 0.25
SNAI2O43623 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.63■□□□□ 0.25
SNAI2O43623 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.63■□□□□ 0.25
SNAI2O43623 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.63■□□□□ 0.25
SNAI2O43623 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.63■□□□□ 0.25
SNAI2O43623 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNAI2O43623 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNAI2O43623 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNAI2O43623 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNAI2O43623 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNAI2O43623 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNAI2O43623 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNAI2O43623 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.62■□□□□ 0.25
SNAI2O43623 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SNAI2O43623 RPS2P7-201ENST00000447334 885 ntBASIC16.62■□□□□ 0.25
SNAI2O43623 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.62■□□□□ 0.25
SNAI2O43623 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.62■□□□□ 0.25
SNAI2O43623 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNAI2O43623 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 AL592295.1-201ENST00000400984 884 ntBASIC16.61■□□□□ 0.25
SNAI2O43623 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SNAI2O43623 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SNAI2O43623 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.61■□□□□ 0.25
SNAI2O43623 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNAI2O43623 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNAI2O43623 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SNAI2O43623 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNAI2O43623 AL022069.1-201ENST00000568025 1636 ntBASIC16.6■□□□□ 0.25
SNAI2O43623 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNAI2O43623 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNAI2O43623 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.6■□□□□ 0.25
SNAI2O43623 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
SNAI2O43623 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNAI2O43623 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNAI2O43623 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SNAI2O43623 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNAI2O43623 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.6■□□□□ 0.25
SNAI2O43623 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNAI2O43623 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SNAI2O43623 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNAI2O43623 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SNAI2O43623 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNAI2O43623 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNAI2O43623 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
SNAI2O43623 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SNAI2O43623 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNAI2O43623 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNAI2O43623 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNAI2O43623 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNAI2O43623 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.59■□□□□ 0.25
SNAI2O43623 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SNAI2O43623 AC009831.1-201ENST00000580420 1582 ntBASIC16.59■□□□□ 0.25
SNAI2O43623 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNAI2O43623 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SNAI2O43623 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNAI2O43623 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNAI2O43623 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNAI2O43623 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SNAI2O43623 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNAI2O43623 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms