Protein–RNA interactions for Protein: Q08954

YPL199C, Smr domain-containing protein YPL199C, yeastyeast

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL199CQ08954 DDR2YOL052C-A 186 nt9.71□□□□□ -0.86
YPL199CQ08954 FMP45YDL222C 930 nt9.7□□□□□ -0.86
YPL199CQ08954 SNF1YDR477W 1902 nt9.7□□□□□ -0.86
YPL199CQ08954 TRM5YHR070W 1500 nt9.69□□□□□ -0.86
YPL199CQ08954 BNA2YJR078W 1362 nt9.69□□□□□ -0.86
YPL199CQ08954 GAL1YBR020W 1587 nt9.69□□□□□ -0.86
YPL199CQ08954 YDL086C-AYDL086C-A 435 nt9.68□□□□□ -0.86
YPL199CQ08954 PBP1YGR178C 2169 nt9.68□□□□□ -0.86
YPL199CQ08954 CYT2YKL087C 675 nt9.67□□□□□ -0.86
YPL199CQ08954 YCL074WYCL074W 927 nt9.66□□□□□ -0.86
YPL199CQ08954 IRC24YIR036C 792 nt9.66□□□□□ -0.86
YPL199CQ08954 FRD1YEL047C 1413 nt9.65□□□□□ -0.86
YPL199CQ08954 YGR259CYGR259C 441 nt9.65□□□□□ -0.86
YPL199CQ08954 DUS1YML080W 1272 nt9.64□□□□□ -0.87
YPL199CQ08954 ANP1YEL036C 1503 nt9.64□□□□□ -0.87
YPL199CQ08954 PUS2YGL063W 1113 nt9.63□□□□□ -0.87
YPL199CQ08954 MIC12YBR262C 321 nt9.63□□□□□ -0.87
YPL199CQ08954 YKR040CYKR040C 504 nt9.62□□□□□ -0.87
YPL199CQ08954 RPM1RPM1 483 nt9.62□□□□□ -0.87
YPL199CQ08954 DIC1YLR348C 897 nt9.61□□□□□ -0.87
YPL199CQ08954 AGP1YCL025C 1902 nt9.6□□□□□ -0.87
YPL199CQ08954 ERV46YAL042W 1248 nt9.6□□□□□ -0.87
YPL199CQ08954 AQY1YPR192W 918 nt9.59□□□□□ -0.87
YPL199CQ08954 YPR011CYPR011C 981 nt9.56□□□□□ -0.88
YPL199CQ08954 HHO1YPL127C 777 nt9.55□□□□□ -0.88
YPL199CQ08954 CMP2YML057W 1815 nt9.53□□□□□ -0.88
YPL199CQ08954 LPX1YOR084W 1164 nt9.52□□□□□ -0.89
YPL199CQ08954 FEN2YCR028C 1539 nt9.51□□□□□ -0.89
YPL199CQ08954 YDR524C-BYDR524C-B 201 nt9.51□□□□□ -0.89
YPL199CQ08954 STB1YNL309W 1263 nt9.51□□□□□ -0.89
YPL199CQ08954 SPC25YER018C 666 nt9.5□□□□□ -0.89
YPL199CQ08954 tM(CAU)CtM(CAU)C 72 nt9.49□□□□□ -0.89
YPL199CQ08954 IMT4tM(CAU)E 72 nt9.49□□□□□ -0.89
YPL199CQ08954 IMT3tM(CAU)J3 72 nt9.49□□□□□ -0.89
YPL199CQ08954 IMT1tM(CAU)O1 72 nt9.49□□□□□ -0.89
YPL199CQ08954 IMT2tM(CAU)P 72 nt9.49□□□□□ -0.89
YPL199CQ08954 GPI16YHR188C 1833 nt9.47□□□□□ -0.89
YPL199CQ08954 YGR201CYGR201C 678 nt9.46□□□□□ -0.9
YPL199CQ08954 YIR016WYIR016W 798 nt9.45□□□□□ -0.9
YPL199CQ08954 RDN18-1RDN18-1 1800 nt9.43□□□□□ -0.9
YPL199CQ08954 RDN18-2RDN18-2 1800 nt9.43□□□□□ -0.9
YPL199CQ08954 STR3YGL184C 1398 nt9.43□□□□□ -0.9
YPL199CQ08954 XDJ1YLR090W 1380 nt9.43□□□□□ -0.9
YPL199CQ08954 NDI1YML120C 1542 nt9.38□□□□□ -0.91
YPL199CQ08954 VPS60YDR486C 690 nt9.38□□□□□ -0.91
YPL199CQ08954 TIM23YNR017W 669 nt9.37□□□□□ -0.91
YPL199CQ08954 YAT1YAR035W 2064 nt9.36□□□□□ -0.91
YPL199CQ08954 YLR179CYLR179C 606 nt9.36□□□□□ -0.91
YPL199CQ08954 CCT4YDL143W 1587 nt9.36□□□□□ -0.91
YPL199CQ08954 RTN2YDL204W 1182 nt9.34□□□□□ -0.91
YPL199CQ08954 HSL7YBR133C 2484 nt9.33□□□□□ -0.92
YPL199CQ08954 YLR235CYLR235C 399 nt9.33□□□□□ -0.92
YPL199CQ08954 AQY2YLL052C 450 nt9.32□□□□□ -0.92
YPL199CQ08954 DUT1YBR252W 444 nt9.32□□□□□ -0.92
YPL199CQ08954 SWC5YBR231C 912 nt9.31□□□□□ -0.92
YPL199CQ08954 ALG3YBL082C 1377 nt9.31□□□□□ -0.92
YPL199CQ08954 GOR1YNL274C 1053 nt9.3□□□□□ -0.92
YPL199CQ08954 AHT1YHR093W 549 nt9.29□□□□□ -0.92
YPL199CQ08954 PTH1YHR189W 573 nt9.29□□□□□ -0.92
YPL199CQ08954 GDH3YAL062W 1374 nt9.28□□□□□ -0.92
YPL199CQ08954 AVT6YER119C 1347 nt9.27□□□□□ -0.93
YPL199CQ08954 SPT20YOL148C 1815 nt9.26□□□□□ -0.93
YPL199CQ08954 INA1YLR413W 2028 nt9.21□□□□□ -0.94
YPL199CQ08954 YPR064WYPR064W 420 nt9.2□□□□□ -0.94
YPL199CQ08954 RDN25-1RDN25-1 3396 nt9.16□□□□□ -0.94
YPL199CQ08954 RDN25-2RDN25-2 3396 nt9.16□□□□□ -0.94
YPL199CQ08954 RPC82YPR190C 1965 nt9.15□□□□□ -0.94
YPL199CQ08954 HIF1YLL022C 1158 nt9.14□□□□□ -0.95
YPL199CQ08954 ALD4YOR374W 1560 nt9.13□□□□□ -0.95
YPL199CQ08954 YKL030WYKL030W 606 nt9.13□□□□□ -0.95
YPL199CQ08954 PLB1YMR008C 1995 nt9.12□□□□□ -0.95
YPL199CQ08954 TAD3YLR316C 969 nt9.11□□□□□ -0.95
YPL199CQ08954 HEL2YDR266C 1920 nt9.09□□□□□ -0.95
YPL199CQ08954 ARP6YLR085C 1317 nt9.08□□□□□ -0.96
YPL199CQ08954 SHM2YLR058C 1410 nt9.07□□□□□ -0.96
YPL199CQ08954 PRM5YIL117C 957 nt9.07□□□□□ -0.96
YPL199CQ08954 DAT1YML113W 747 nt9.07□□□□□ -0.96
YPL199CQ08954 SPP1YPL138C 1062 nt9.07□□□□□ -0.96
YPL199CQ08954 NBP35YGL091C 987 nt9.04□□□□□ -0.96
YPL199CQ08954 YCR102CYCR102C 1107 nt9.02□□□□□ -0.97
YPL199CQ08954 TIM17YJL143W 477 nt9.02□□□□□ -0.97
YPL199CQ08954 YLR415CYLR415C 339 nt9.02□□□□□ -0.97
YPL199CQ08954 RIM8YGL045W 1629 nt9.02□□□□□ -0.97
YPL199CQ08954 BDH1YAL060W 1149 nt9.01□□□□□ -0.97
YPL199CQ08954 ZRT3YKL175W 1512 nt9□□□□□ -0.97
YPL199CQ08954 YGL114WYGL114W 2178 nt8.98□□□□□ -0.97
YPL199CQ08954 SAM35YHR083W 990 nt8.96□□□□□ -0.98
YPL199CQ08954 NIT1YIL164C 600 nt8.96□□□□□ -0.98
YPL199CQ08954 UTR1YJR049C 1593 nt8.95□□□□□ -0.98
YPL199CQ08954 MUP1YGR055W 1725 nt8.94□□□□□ -0.98
YPL199CQ08954 LSC2YGR244C 1284 nt8.89□□□□□ -0.99
YPL199CQ08954 GAP1YKR039W 1809 nt8.89□□□□□ -0.99
YPL199CQ08954 HOL1YNR055C 1761 nt8.89□□□□□ -0.99
YPL199CQ08954 SGT2YOR007C 1041 nt8.88□□□□□ -0.99
YPL199CQ08954 YJL067WYJL067W 351 nt8.87□□□□□ -0.99
YPL199CQ08954 tL(GAG)GtL(GAG)G 82 nt8.85□□□□□ -0.99
YPL199CQ08954 MRPL8YJL063C 717 nt8.85□□□□□ -0.99
YPL199CQ08954 YSP3YOR003W 1437 nt8.85□□□□□ -0.99
YPL199CQ08954 TIR3YIL011W 810 nt8.84□□□□□ -0.99
YPL199CQ08954 FRE6YLL051C 2139 nt8.84□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms