Protein–RNA interactions for Protein: Q06696

VPS36, Vacuolar protein-sorting-associated protein 36, yeastyeast

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS36Q06696 HEM12YDR047W 1089 nt10.18□□□□□ -0.78
VPS36Q06696 MIC10YCL057C-A 294 nt10.18□□□□□ -0.78
VPS36Q06696 SWE1YJL187C 2460 nt10.17□□□□□ -0.78
VPS36Q06696 SNG1YGR197C 1644 nt10.16□□□□□ -0.78
VPS36Q06696 YHR056W-AYHR056W-A 435 nt10.16□□□□□ -0.78
VPS36Q06696 TIM23YNR017W 669 nt10.15□□□□□ -0.78
VPS36Q06696 DDR2YOL052C-A 186 nt10.14□□□□□ -0.79
VPS36Q06696 AQY1YPR192W 918 nt10.14□□□□□ -0.79
VPS36Q06696 RPM1RPM1 483 nt10.11□□□□□ -0.79
VPS36Q06696 YDL086C-AYDL086C-A 435 nt10.1□□□□□ -0.79
VPS36Q06696 YKL030WYKL030W 606 nt10.1□□□□□ -0.79
VPS36Q06696 YLR179CYLR179C 606 nt10.1□□□□□ -0.79
VPS36Q06696 ANP1YEL036C 1503 nt10.08□□□□□ -0.8
VPS36Q06696 HSL7YBR133C 2484 nt10.06□□□□□ -0.8
VPS36Q06696 SPC25YER018C 666 nt10.06□□□□□ -0.8
VPS36Q06696 STB1YNL309W 1263 nt10.06□□□□□ -0.8
VPS36Q06696 RAX1YOR301W 1308 nt10.06□□□□□ -0.8
VPS36Q06696 RTG1YOL067C 534 nt10.05□□□□□ -0.8
VPS36Q06696 WSC2YNL283C 1512 nt10.05□□□□□ -0.8
VPS36Q06696 YDR524C-BYDR524C-B 201 nt10.04□□□□□ -0.8
VPS36Q06696 AHT1YHR093W 549 nt10.04□□□□□ -0.8
VPS36Q06696 RDN25-1RDN25-1 3396 nt10.02□□□□□ -0.81
VPS36Q06696 RDN25-2RDN25-2 3396 nt10.02□□□□□ -0.81
VPS36Q06696 FEN2YCR028C 1539 nt10□□□□□ -0.81
VPS36Q06696 GPI16YHR188C 1833 nt10□□□□□ -0.81
VPS36Q06696 AAC1YMR056C 930 nt9.99□□□□□ -0.81
VPS36Q06696 CCA1YER168C 1641 nt9.98□□□□□ -0.81
VPS36Q06696 YPR064WYPR064W 420 nt9.98□□□□□ -0.81
VPS36Q06696 CCT4YDL143W 1587 nt9.97□□□□□ -0.81
VPS36Q06696 CMP2YML057W 1815 nt9.96□□□□□ -0.81
VPS36Q06696 VPS60YDR486C 690 nt9.96□□□□□ -0.82
VPS36Q06696 MIC12YBR262C 321 nt9.96□□□□□ -0.82
VPS36Q06696 FUR4YBR021W 1902 nt9.95□□□□□ -0.82
VPS36Q06696 BNA2YJR078W 1362 nt9.94□□□□□ -0.82
VPS36Q06696 NME1NME1 340 nt9.94□□□□□ -0.82
VPS36Q06696 ALG3YBL082C 1377 nt9.92□□□□□ -0.82
VPS36Q06696 PRP4YPR178W 1398 nt9.92□□□□□ -0.82
VPS36Q06696 YIR016WYIR016W 798 nt9.92□□□□□ -0.82
VPS36Q06696 TAD3YLR316C 969 nt9.92□□□□□ -0.82
VPS36Q06696 YEL076C-AYEL076C-A 651 nt9.91□□□□□ -0.82
VPS36Q06696 YEL076CYEL076C 651 nt9.91□□□□□ -0.82
VPS36Q06696 YLR464WYLR464W 651 nt9.91□□□□□ -0.82
VPS36Q06696 SWC5YBR231C 912 nt9.88□□□□□ -0.83
VPS36Q06696 CYT2YKL087C 675 nt9.87□□□□□ -0.83
VPS36Q06696 DPS1YLL018C 1674 nt9.87□□□□□ -0.83
VPS36Q06696 MRPL8YJL063C 717 nt9.86□□□□□ -0.83
VPS36Q06696 BIO5YNR056C 1686 nt9.86□□□□□ -0.83
VPS36Q06696 PBP1YGR178C 2169 nt9.85□□□□□ -0.83
VPS36Q06696 AGP1YCL025C 1902 nt9.84□□□□□ -0.83
VPS36Q06696 HUA1YGR268C 597 nt9.84□□□□□ -0.83
VPS36Q06696 tL(GAG)GtL(GAG)G 82 nt9.82□□□□□ -0.84
VPS36Q06696 BDH1YAL060W 1149 nt9.82□□□□□ -0.84
VPS36Q06696 HHO1YPL127C 777 nt9.82□□□□□ -0.84
VPS36Q06696 YGR201CYGR201C 678 nt9.79□□□□□ -0.84
VPS36Q06696 ADO1YJR105W 1023 nt9.79□□□□□ -0.84
VPS36Q06696 HEL2YDR266C 1920 nt9.79□□□□□ -0.84
VPS36Q06696 BMT6YLR063W 1098 nt9.76□□□□□ -0.85
VPS36Q06696 YLR415CYLR415C 339 nt9.76□□□□□ -0.85
VPS36Q06696 XDJ1YLR090W 1380 nt9.75□□□□□ -0.85
VPS36Q06696 SNF1YDR477W 1902 nt9.73□□□□□ -0.85
VPS36Q06696 YSP3YOR003W 1437 nt9.73□□□□□ -0.85
VPS36Q06696 YCL074WYCL074W 927 nt9.7□□□□□ -0.86
VPS36Q06696 DUS1YML080W 1272 nt9.7□□□□□ -0.86
VPS36Q06696 DUT1YBR252W 444 nt9.68□□□□□ -0.86
VPS36Q06696 YAT1YAR035W 2064 nt9.67□□□□□ -0.86
VPS36Q06696 GDH3YAL062W 1374 nt9.66□□□□□ -0.86
VPS36Q06696 SHM2YLR058C 1410 nt9.65□□□□□ -0.86
VPS36Q06696 AVT6YER119C 1347 nt9.64□□□□□ -0.87
VPS36Q06696 SFP1YLR403W 2052 nt9.64□□□□□ -0.87
VPS36Q06696 YKR005CYKR005C 1578 nt9.63□□□□□ -0.87
VPS36Q06696 STR3YGL184C 1398 nt9.63□□□□□ -0.87
VPS36Q06696 RDN18-1RDN18-1 1800 nt9.62□□□□□ -0.87
VPS36Q06696 RDN18-2RDN18-2 1800 nt9.62□□□□□ -0.87
VPS36Q06696 TIM17YJL143W 477 nt9.62□□□□□ -0.87
VPS36Q06696 GOR1YNL274C 1053 nt9.62□□□□□ -0.87
VPS36Q06696 YNL115CYNL115C 1935 nt9.61□□□□□ -0.87
VPS36Q06696 NDI1YML120C 1542 nt9.61□□□□□ -0.87
VPS36Q06696 PEX25YPL112C 1185 nt9.6□□□□□ -0.87
VPS36Q06696 MET2YNL277W 1461 nt9.59□□□□□ -0.87
VPS36Q06696 NPP1YCR026C 2229 nt9.59□□□□□ -0.87
VPS36Q06696 NIT1YIL164C 600 nt9.58□□□□□ -0.88
VPS36Q06696 YGR259CYGR259C 441 nt9.56□□□□□ -0.88
VPS36Q06696 YFR018CYFR018C 1092 nt9.55□□□□□ -0.88
VPS36Q06696 DAT1YML113W 747 nt9.55□□□□□ -0.88
VPS36Q06696 YFL066CYFL066C 1179 nt9.54□□□□□ -0.88
VPS36Q06696 IRC24YIR036C 792 nt9.52□□□□□ -0.89
VPS36Q06696 AQY2YLL052C 450 nt9.52□□□□□ -0.89
VPS36Q06696 GID7YCL039W 2238 nt9.52□□□□□ -0.89
VPS36Q06696 VPS75YNL246W 795 nt9.51□□□□□ -0.89
VPS36Q06696 SGT2YOR007C 1041 nt9.51□□□□□ -0.89
VPS36Q06696 SSN3YPL042C 1668 nt9.48□□□□□ -0.89
VPS36Q06696 PRE6YOL038W 765 nt9.47□□□□□ -0.89
VPS36Q06696 RTN2YDL204W 1182 nt9.46□□□□□ -0.9
VPS36Q06696 HMG2YLR450W 3138 nt9.46□□□□□ -0.9
VPS36Q06696 RIM8YGL045W 1629 nt9.45□□□□□ -0.9
VPS36Q06696 SPT20YOL148C 1815 nt9.45□□□□□ -0.9
VPS36Q06696 YCR102CYCR102C 1107 nt9.45□□□□□ -0.9
VPS36Q06696 YDR094WYDR094W 336 nt9.45□□□□□ -0.9
VPS36Q06696 NBP35YGL091C 987 nt9.45□□□□□ -0.9
VPS36Q06696 MAE1YKL029C 2010 nt9.39□□□□□ -0.91
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms