Protein–RNA interactions for Protein: Q04272

VPS20, Vacuolar protein sorting-associated protein 20, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS20Q04272 RAX1YOR301W 1308 nt12.6□□□□□ -0.39
VPS20Q04272 WSC2YNL283C 1512 nt12.59□□□□□ -0.39
VPS20Q04272 CCA1YER168C 1641 nt12.59□□□□□ -0.39
VPS20Q04272 STB1YNL309W 1263 nt12.58□□□□□ -0.4
VPS20Q04272 YDR524C-BYDR524C-B 201 nt12.57□□□□□ -0.4
VPS20Q04272 SPC25YER018C 666 nt12.57□□□□□ -0.4
VPS20Q04272 YKL030WYKL030W 606 nt12.57□□□□□ -0.4
VPS20Q04272 AHT1YHR093W 549 nt12.53□□□□□ -0.4
VPS20Q04272 RTG1YOL067C 534 nt12.53□□□□□ -0.4
VPS20Q04272 FEN2YCR028C 1539 nt12.52□□□□□ -0.41
VPS20Q04272 BOR1YNL275W 1731 nt12.5□□□□□ -0.41
VPS20Q04272 VPS60YDR486C 690 nt12.48□□□□□ -0.41
VPS20Q04272 GPI16YHR188C 1833 nt12.48□□□□□ -0.41
VPS20Q04272 HSP60YLR259C 1719 nt12.48□□□□□ -0.41
VPS20Q04272 MIC12YBR262C 321 nt12.47□□□□□ -0.41
VPS20Q04272 CCT4YDL143W 1587 nt12.46□□□□□ -0.42
VPS20Q04272 ALG3YBL082C 1377 nt12.45□□□□□ -0.42
VPS20Q04272 FUR4YBR021W 1902 nt12.44□□□□□ -0.42
VPS20Q04272 AGP1YCL025C 1902 nt12.43□□□□□ -0.42
VPS20Q04272 YIR016WYIR016W 798 nt12.42□□□□□ -0.42
VPS20Q04272 YPR064WYPR064W 420 nt12.42□□□□□ -0.42
VPS20Q04272 BNA2YJR078W 1362 nt12.42□□□□□ -0.42
VPS20Q04272 GLK1YCL040W 1503 nt12.37□□□□□ -0.43
VPS20Q04272 TAD3YLR316C 969 nt12.37□□□□□ -0.43
VPS20Q04272 SWC5YBR231C 912 nt12.35□□□□□ -0.43
VPS20Q04272 HHO1YPL127C 777 nt12.31□□□□□ -0.44
VPS20Q04272 YEL076C-AYEL076C-A 651 nt12.3□□□□□ -0.44
VPS20Q04272 YEL076CYEL076C 651 nt12.3□□□□□ -0.44
VPS20Q04272 YLR464WYLR464W 651 nt12.3□□□□□ -0.44
VPS20Q04272 BDH1YAL060W 1149 nt12.28□□□□□ -0.44
VPS20Q04272 XDJ1YLR090W 1380 nt12.26□□□□□ -0.45
VPS20Q04272 DUT1YBR252W 444 nt12.24□□□□□ -0.45
VPS20Q04272 YGR201CYGR201C 678 nt12.21□□□□□ -0.45
VPS20Q04272 tL(GAG)GtL(GAG)G 82 nt12.2□□□□□ -0.46
VPS20Q04272 HUA1YGR268C 597 nt12.2□□□□□ -0.46
VPS20Q04272 DUS1YML080W 1272 nt12.2□□□□□ -0.46
VPS20Q04272 PRP4YPR178W 1398 nt12.19□□□□□ -0.46
VPS20Q04272 YCL074WYCL074W 927 nt12.16□□□□□ -0.46
VPS20Q04272 YLR415CYLR415C 339 nt12.16□□□□□ -0.46
VPS20Q04272 YSP3YOR003W 1437 nt12.15□□□□□ -0.46
VPS20Q04272 MRPL8YJL063C 717 nt12.15□□□□□ -0.46
VPS20Q04272 RDN18-1RDN18-1 1800 nt12.15□□□□□ -0.46
VPS20Q04272 RDN18-2RDN18-2 1800 nt12.15□□□□□ -0.46
VPS20Q04272 YJL225CYJL225C 5277 nt12.13□□□□□ -0.47
VPS20Q04272 YKR005CYKR005C 1578 nt12.13□□□□□ -0.47
VPS20Q04272 DPS1YLL018C 1674 nt12.13□□□□□ -0.47
VPS20Q04272 GDH3YAL062W 1374 nt12.12□□□□□ -0.47
VPS20Q04272 AVT6YER119C 1347 nt12.11□□□□□ -0.47
VPS20Q04272 SHM2YLR058C 1410 nt12.1□□□□□ -0.47
VPS20Q04272 STR3YGL184C 1398 nt12.09□□□□□ -0.47
VPS20Q04272 ALG12YNR030W 1656 nt12.09□□□□□ -0.47
VPS20Q04272 ADO1YJR105W 1023 nt12.07□□□□□ -0.48
VPS20Q04272 GOR1YNL274C 1053 nt12.03□□□□□ -0.48
VPS20Q04272 SNF1YDR477W 1902 nt12.03□□□□□ -0.48
VPS20Q04272 YGR259CYGR259C 441 nt12.02□□□□□ -0.49
VPS20Q04272 AAC1YMR056C 930 nt12.02□□□□□ -0.49
VPS20Q04272 UME6YDR207C 2511 nt12.02□□□□□ -0.49
VPS20Q04272 NIT1YIL164C 600 nt12.01□□□□□ -0.49
VPS20Q04272 YNL115CYNL115C 1935 nt12.01□□□□□ -0.49
VPS20Q04272 TIM17YJL143W 477 nt11.99□□□□□ -0.49
VPS20Q04272 AQY2YLL052C 450 nt11.99□□□□□ -0.49
VPS20Q04272 BMT6YLR063W 1098 nt11.98□□□□□ -0.49
VPS20Q04272 YFL066CYFL066C 1179 nt11.97□□□□□ -0.49
VPS20Q04272 PEX25YPL112C 1185 nt11.97□□□□□ -0.49
VPS20Q04272 BIO5YNR056C 1686 nt11.94□□□□□ -0.5
VPS20Q04272 Q0182Q0182 405 nt11.93□□□□□ -0.5
VPS20Q04272 SGT2YOR007C 1041 nt11.92□□□□□ -0.5
VPS20Q04272 DAT1YML113W 747 nt11.91□□□□□ -0.5
VPS20Q04272 MCH5YOR306C 1566 nt11.9□□□□□ -0.5
VPS20Q04272 IRC24YIR036C 792 nt11.87□□□□□ -0.51
VPS20Q04272 PRE6YOL038W 765 nt11.87□□□□□ -0.51
VPS20Q04272 YFR018CYFR018C 1092 nt11.86□□□□□ -0.51
VPS20Q04272 RTN2YDL204W 1182 nt11.83□□□□□ -0.52
VPS20Q04272 NBP35YGL091C 987 nt11.83□□□□□ -0.52
VPS20Q04272 VPS75YNL246W 795 nt11.83□□□□□ -0.52
VPS20Q04272 YCR102CYCR102C 1107 nt11.79□□□□□ -0.52
VPS20Q04272 NAR1YNL240C 1476 nt11.78□□□□□ -0.52
VPS20Q04272 PBP1YGR178C 2169 nt11.77□□□□□ -0.53
VPS20Q04272 PLB1YMR008C 1995 nt11.74□□□□□ -0.53
VPS20Q04272 ARP6YLR085C 1317 nt11.71□□□□□ -0.53
VPS20Q04272 YDR094WYDR094W 336 nt11.7□□□□□ -0.54
VPS20Q04272 SHH4YLR164W 507 nt11.7□□□□□ -0.54
VPS20Q04272 YDR010CYDR010C 333 nt11.65□□□□□ -0.54
VPS20Q04272 CYT2YKL087C 675 nt11.64□□□□□ -0.55
VPS20Q04272 TIR3YIL011W 810 nt11.61□□□□□ -0.55
VPS20Q04272 PAU7YAR020C 168 nt11.61□□□□□ -0.55
VPS20Q04272 PRM5YIL117C 957 nt11.6□□□□□ -0.55
VPS20Q04272 MIR1YJR077C 936 nt11.6□□□□□ -0.55
VPS20Q04272 PAU16YKL224C 372 nt11.6□□□□□ -0.55
VPS20Q04272 SHB17YKR043C 816 nt11.6□□□□□ -0.55
VPS20Q04272 UBX6YJL048C 1191 nt11.59□□□□□ -0.55
VPS20Q04272 RRT5YFR032C 870 nt11.58□□□□□ -0.56
VPS20Q04272 SFA1YDL168W 1161 nt11.56□□□□□ -0.56
VPS20Q04272 PRO1YDR300C 1287 nt11.56□□□□□ -0.56
VPS20Q04272 UTR1YJR049C 1593 nt11.56□□□□□ -0.56
VPS20Q04272 LSC2YGR244C 1284 nt11.54□□□□□ -0.56
VPS20Q04272 POM34YLR018C 900 nt11.53□□□□□ -0.56
VPS20Q04272 GAP1YKR039W 1809 nt11.53□□□□□ -0.56
VPS20Q04272 HIF1YLL022C 1158 nt11.52□□□□□ -0.57
VPS20Q04272 YHL019W-AYHL019W-A 594 nt11.5□□□□□ -0.57
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms