Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 TIM23YNR017W 669 nt11.31□□□□□ -0.6
MSH6Q03834 DDR2YOL052C-A 186 nt11.3□□□□□ -0.6
MSH6Q03834 HUA1YGR268C 597 nt11.28□□□□□ -0.6
MSH6Q03834 ATF2YGR177C 1608 nt11.27□□□□□ -0.6
MSH6Q03834 GAL1YBR020W 1587 nt11.27□□□□□ -0.61
MSH6Q03834 TRM5YHR070W 1500 nt11.26□□□□□ -0.61
MSH6Q03834 RDN37-1RDN37-1 5354 nt11.26□□□□□ -0.61
MSH6Q03834 RDN37-2RDN37-2 5354 nt11.26□□□□□ -0.61
MSH6Q03834 YLR179CYLR179C 606 nt11.26□□□□□ -0.61
MSH6Q03834 AQY1YPR192W 918 nt11.26□□□□□ -0.61
MSH6Q03834 MCH5YOR306C 1566 nt11.24□□□□□ -0.61
MSH6Q03834 YHR056W-AYHR056W-A 435 nt11.24□□□□□ -0.61
MSH6Q03834 SWE1YJL187C 2460 nt11.24□□□□□ -0.61
MSH6Q03834 SNG1YGR197C 1644 nt11.21□□□□□ -0.61
MSH6Q03834 RAX1YOR301W 1308 nt11.2□□□□□ -0.62
MSH6Q03834 MIC10YCL057C-A 294 nt11.2□□□□□ -0.62
MSH6Q03834 YDL086C-AYDL086C-A 435 nt11.19□□□□□ -0.62
MSH6Q03834 WSC2YNL283C 1512 nt11.17□□□□□ -0.62
MSH6Q03834 BNA2YJR078W 1362 nt11.16□□□□□ -0.62
MSH6Q03834 YPR064WYPR064W 420 nt11.16□□□□□ -0.62
MSH6Q03834 YDR524C-BYDR524C-B 201 nt11.14□□□□□ -0.63
MSH6Q03834 STB1YNL309W 1263 nt11.14□□□□□ -0.63
MSH6Q03834 AHT1YHR093W 549 nt11.12□□□□□ -0.63
MSH6Q03834 GPI16YHR188C 1833 nt11.12□□□□□ -0.63
MSH6Q03834 ANP1YEL036C 1503 nt11.1□□□□□ -0.63
MSH6Q03834 UBX6YJL048C 1191 nt11.1□□□□□ -0.63
MSH6Q03834 SPC25YER018C 666 nt11.09□□□□□ -0.63
MSH6Q03834 TAD3YLR316C 969 nt11.08□□□□□ -0.64
MSH6Q03834 tL(GAG)GtL(GAG)G 82 nt11.07□□□□□ -0.64
MSH6Q03834 FEN2YCR028C 1539 nt11.05□□□□□ -0.64
MSH6Q03834 CCA1YER168C 1641 nt11.03□□□□□ -0.64
MSH6Q03834 YDR094WYDR094W 336 nt11.03□□□□□ -0.64
MSH6Q03834 CSM2YIL132C 642 nt11.03□□□□□ -0.64
MSH6Q03834 SWC5YBR231C 912 nt11.03□□□□□ -0.64
MSH6Q03834 ALG12YNR030W 1656 nt11.02□□□□□ -0.64
MSH6Q03834 CCT4YDL143W 1587 nt11.01□□□□□ -0.65
MSH6Q03834 VPS60YDR486C 690 nt10.99□□□□□ -0.65
MSH6Q03834 MIC12YBR262C 321 nt10.97□□□□□ -0.65
MSH6Q03834 YIR016WYIR016W 798 nt10.96□□□□□ -0.65
MSH6Q03834 HHO1YPL127C 777 nt10.96□□□□□ -0.65
MSH6Q03834 GLK1YCL040W 1503 nt10.94□□□□□ -0.66
MSH6Q03834 HSP60YLR259C 1719 nt10.94□□□□□ -0.66
MSH6Q03834 BDH1YAL060W 1149 nt10.93□□□□□ -0.66
MSH6Q03834 FUR4YBR021W 1902 nt10.93□□□□□ -0.66
MSH6Q03834 DUS1YML080W 1272 nt10.92□□□□□ -0.66
MSH6Q03834 YFR018CYFR018C 1092 nt10.91□□□□□ -0.66
MSH6Q03834 YLR415CYLR415C 339 nt10.9□□□□□ -0.66
MSH6Q03834 ALG3YBL082C 1377 nt10.89□□□□□ -0.67
MSH6Q03834 YGR201CYGR201C 678 nt10.88□□□□□ -0.67
MSH6Q03834 PRE6YOL038W 765 nt10.88□□□□□ -0.67
MSH6Q03834 YSP3YOR003W 1437 nt10.87□□□□□ -0.67
MSH6Q03834 YCL074WYCL074W 927 nt10.81□□□□□ -0.68
MSH6Q03834 YFL015W-AYFL015W-A 318 nt10.81□□□□□ -0.68
MSH6Q03834 PEX25YPL112C 1185 nt10.81□□□□□ -0.68
MSH6Q03834 YFL066CYFL066C 1179 nt10.8□□□□□ -0.68
MSH6Q03834 BMT6YLR063W 1098 nt10.8□□□□□ -0.68
MSH6Q03834 PRP4YPR178W 1398 nt10.79□□□□□ -0.68
MSH6Q03834 PAU16YKL224C 372 nt10.79□□□□□ -0.68
MSH6Q03834 AGP1YCL025C 1902 nt10.79□□□□□ -0.68
MSH6Q03834 XDJ1YLR090W 1380 nt10.78□□□□□ -0.68
MSH6Q03834 RPM1RPM1 483 nt10.77□□□□□ -0.69
MSH6Q03834 GOR1YNL274C 1053 nt10.77□□□□□ -0.69
MSH6Q03834 YNL115CYNL115C 1935 nt10.76□□□□□ -0.69
MSH6Q03834 AVT6YER119C 1347 nt10.75□□□□□ -0.69
MSH6Q03834 GDH3YAL062W 1374 nt10.75□□□□□ -0.69
MSH6Q03834 RRT5YFR032C 870 nt10.74□□□□□ -0.69
MSH6Q03834 TIM17YJL143W 477 nt10.73□□□□□ -0.69
MSH6Q03834 YKR005CYKR005C 1578 nt10.7□□□□□ -0.7
MSH6Q03834 DPS1YLL018C 1674 nt10.69□□□□□ -0.7
MSH6Q03834 AAC1YMR056C 930 nt10.69□□□□□ -0.7
MSH6Q03834 NAR1YNL240C 1476 nt10.67□□□□□ -0.7
MSH6Q03834 YGR259CYGR259C 441 nt10.66□□□□□ -0.7
MSH6Q03834 SHM2YLR058C 1410 nt10.66□□□□□ -0.7
MSH6Q03834 AQY2YLL052C 450 nt10.65□□□□□ -0.7
MSH6Q03834 VPS75YNL246W 795 nt10.65□□□□□ -0.7
MSH6Q03834 MET8YBR213W 825 nt10.65□□□□□ -0.7
MSH6Q03834 PAU21YOR394W 495 nt10.64□□□□□ -0.71
MSH6Q03834 PAU22YPL282C 495 nt10.64□□□□□ -0.71
MSH6Q03834 STR3YGL184C 1398 nt10.62□□□□□ -0.71
MSH6Q03834 DUT1YBR252W 444 nt10.61□□□□□ -0.71
MSH6Q03834 CLB6YGR109C 1143 nt10.6□□□□□ -0.71
MSH6Q03834 HSL7YBR133C 2484 nt10.58□□□□□ -0.72
MSH6Q03834 RDN18-1RDN18-1 1800 nt10.57□□□□□ -0.72
MSH6Q03834 RDN18-2RDN18-2 1800 nt10.57□□□□□ -0.72
MSH6Q03834 PAU7YAR020C 168 nt10.56□□□□□ -0.72
MSH6Q03834 MIR1YJR077C 936 nt10.55□□□□□ -0.72
MSH6Q03834 ARO7YPR060C 771 nt10.55□□□□□ -0.72
MSH6Q03834 IRC24YIR036C 792 nt10.54□□□□□ -0.72
MSH6Q03834 RTN2YDL204W 1182 nt10.53□□□□□ -0.72
MSH6Q03834 NIT1YIL164C 600 nt10.53□□□□□ -0.72
MSH6Q03834 DAT1YML113W 747 nt10.53□□□□□ -0.72
MSH6Q03834 YCR102CYCR102C 1107 nt10.52□□□□□ -0.73
MSH6Q03834 SGT2YOR007C 1041 nt10.52□□□□□ -0.73
MSH6Q03834 NAT4YMR069W 858 nt10.49□□□□□ -0.73
MSH6Q03834 PBP1YGR178C 2169 nt10.46□□□□□ -0.73
MSH6Q03834 THI74YDR438W 1113 nt10.43□□□□□ -0.74
MSH6Q03834 SNF1YDR477W 1902 nt10.43□□□□□ -0.74
MSH6Q03834 RDN25-1RDN25-1 3396 nt10.42□□□□□ -0.74
MSH6Q03834 RDN25-2RDN25-2 3396 nt10.42□□□□□ -0.74
MSH6Q03834 BIO5YNR056C 1686 nt10.41□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 52.8 ms