Protein–RNA interactions for Protein: Q03390

VPS60, Vacuolar protein-sorting-associated protein 60, yeastyeast

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS60Q03390 DDR2YOL052C-A 186 nt11.75□□□□□ -0.53
VPS60Q03390 TRM5YHR070W 1500 nt11.74□□□□□ -0.53
VPS60Q03390 BIO5YNR056C 1686 nt11.73□□□□□ -0.53
VPS60Q03390 GAL1YBR020W 1587 nt11.73□□□□□ -0.53
VPS60Q03390 LPX1YOR084W 1164 nt11.7□□□□□ -0.54
VPS60Q03390 YDL086C-AYDL086C-A 435 nt11.69□□□□□ -0.54
VPS60Q03390 BMT6YLR063W 1098 nt11.69□□□□□ -0.54
VPS60Q03390 DIC1YLR348C 897 nt11.69□□□□□ -0.54
VPS60Q03390 PBP1YGR178C 2169 nt11.67□□□□□ -0.54
VPS60Q03390 tM(CAU)CtM(CAU)C 72 nt11.67□□□□□ -0.54
VPS60Q03390 IMT4tM(CAU)E 72 nt11.67□□□□□ -0.54
VPS60Q03390 IMT3tM(CAU)J3 72 nt11.67□□□□□ -0.54
VPS60Q03390 IMT1tM(CAU)O1 72 nt11.67□□□□□ -0.54
VPS60Q03390 IMT2tM(CAU)P 72 nt11.67□□□□□ -0.54
VPS60Q03390 BNA2YJR078W 1362 nt11.67□□□□□ -0.54
VPS60Q03390 CYT2YKL087C 675 nt11.66□□□□□ -0.54
VPS60Q03390 SNF1YDR477W 1902 nt11.66□□□□□ -0.54
VPS60Q03390 YKR005CYKR005C 1578 nt11.65□□□□□ -0.54
VPS60Q03390 ANP1YEL036C 1503 nt11.65□□□□□ -0.55
VPS60Q03390 WSC2YNL283C 1512 nt11.63□□□□□ -0.55
VPS60Q03390 AQY1YPR192W 918 nt11.6□□□□□ -0.55
VPS60Q03390 MIC12YBR262C 321 nt11.6□□□□□ -0.55
VPS60Q03390 CMP2YML057W 1815 nt11.58□□□□□ -0.56
VPS60Q03390 YCL074WYCL074W 927 nt11.57□□□□□ -0.56
VPS60Q03390 DUS1YML080W 1272 nt11.57□□□□□ -0.56
VPS60Q03390 AGP1YCL025C 1902 nt11.56□□□□□ -0.56
VPS60Q03390 YDR524C-BYDR524C-B 201 nt11.53□□□□□ -0.56
VPS60Q03390 YGR259CYGR259C 441 nt11.53□□□□□ -0.56
VPS60Q03390 STB1YNL309W 1263 nt11.53□□□□□ -0.56
VPS60Q03390 FEN2YCR028C 1539 nt11.51□□□□□ -0.57
VPS60Q03390 SPC25YER018C 666 nt11.51□□□□□ -0.57
VPS60Q03390 HHO1YPL127C 777 nt11.51□□□□□ -0.57
VPS60Q03390 IRC24YIR036C 792 nt11.49□□□□□ -0.57
VPS60Q03390 GPI16YHR188C 1833 nt11.47□□□□□ -0.57
VPS60Q03390 HSL7YBR133C 2484 nt11.44□□□□□ -0.58
VPS60Q03390 YIR016WYIR016W 798 nt11.43□□□□□ -0.58
VPS60Q03390 TIM23YNR017W 669 nt11.42□□□□□ -0.58
VPS60Q03390 PTH1YHR189W 573 nt11.4□□□□□ -0.58
VPS60Q03390 YLR179CYLR179C 606 nt11.4□□□□□ -0.58
VPS60Q03390 VPS60YDR486C 690 nt11.39□□□□□ -0.59
VPS60Q03390 YGR201CYGR201C 678 nt11.39□□□□□ -0.59
VPS60Q03390 YLR235CYLR235C 399 nt11.39□□□□□ -0.59
VPS60Q03390 XDJ1YLR090W 1380 nt11.37□□□□□ -0.59
VPS60Q03390 CCT4YDL143W 1587 nt11.37□□□□□ -0.59
VPS60Q03390 YAT1YAR035W 2064 nt11.36□□□□□ -0.59
VPS60Q03390 RDN18-1RDN18-1 1800 nt11.35□□□□□ -0.59
VPS60Q03390 RDN18-2RDN18-2 1800 nt11.35□□□□□ -0.59
VPS60Q03390 STR3YGL184C 1398 nt11.34□□□□□ -0.59
VPS60Q03390 ALG3YBL082C 1377 nt11.31□□□□□ -0.6
VPS60Q03390 AHT1YHR093W 549 nt11.31□□□□□ -0.6
VPS60Q03390 NDI1YML120C 1542 nt11.3□□□□□ -0.6
VPS60Q03390 SWC5YBR231C 912 nt11.3□□□□□ -0.6
VPS60Q03390 DUT1YBR252W 444 nt11.27□□□□□ -0.61
VPS60Q03390 AQY2YLL052C 450 nt11.24□□□□□ -0.61
VPS60Q03390 GOR1YNL274C 1053 nt11.23□□□□□ -0.61
VPS60Q03390 SPP1YPL138C 1062 nt11.22□□□□□ -0.61
VPS60Q03390 AVT6YER119C 1347 nt11.21□□□□□ -0.61
VPS60Q03390 RTN2YDL204W 1182 nt11.21□□□□□ -0.61
VPS60Q03390 YPR064WYPR064W 420 nt11.21□□□□□ -0.61
VPS60Q03390 YKL030WYKL030W 606 nt11.19□□□□□ -0.62
VPS60Q03390 RDN25-1RDN25-1 3396 nt11.17□□□□□ -0.62
VPS60Q03390 RDN25-2RDN25-2 3396 nt11.17□□□□□ -0.62
VPS60Q03390 GDH3YAL062W 1374 nt11.16□□□□□ -0.62
VPS60Q03390 SPT20YOL148C 1815 nt11.15□□□□□ -0.62
VPS60Q03390 HEL2YDR266C 1920 nt11.14□□□□□ -0.63
VPS60Q03390 TAD3YLR316C 969 nt11.11□□□□□ -0.63
VPS60Q03390 RPC82YPR190C 1965 nt11.03□□□□□ -0.64
VPS60Q03390 INA1YLR413W 2028 nt11.02□□□□□ -0.65
VPS60Q03390 SHM2YLR058C 1410 nt11.01□□□□□ -0.65
VPS60Q03390 RIM8YGL045W 1629 nt10.99□□□□□ -0.65
VPS60Q03390 BDH1YAL060W 1149 nt10.99□□□□□ -0.65
VPS60Q03390 YLR415CYLR415C 339 nt10.98□□□□□ -0.65
VPS60Q03390 PLB1YMR008C 1995 nt10.97□□□□□ -0.65
VPS60Q03390 DAT1YML113W 747 nt10.96□□□□□ -0.65
VPS60Q03390 TIM17YJL143W 477 nt10.95□□□□□ -0.66
VPS60Q03390 HIF1YLL022C 1158 nt10.95□□□□□ -0.66
VPS60Q03390 ALD4YOR374W 1560 nt10.94□□□□□ -0.66
VPS60Q03390 ARP6YLR085C 1317 nt10.93□□□□□ -0.66
VPS60Q03390 NBP35YGL091C 987 nt10.92□□□□□ -0.66
VPS60Q03390 MOT3YMR070W 1473 nt10.92□□□□□ -0.66
VPS60Q03390 YCR102CYCR102C 1107 nt10.9□□□□□ -0.66
VPS60Q03390 PRM5YIL117C 957 nt10.9□□□□□ -0.66
VPS60Q03390 NIT1YIL164C 600 nt10.89□□□□□ -0.67
VPS60Q03390 YGL114WYGL114W 2178 nt10.89□□□□□ -0.67
VPS60Q03390 MUP1YGR055W 1725 nt10.86□□□□□ -0.67
VPS60Q03390 tL(GAG)GtL(GAG)G 82 nt10.84□□□□□ -0.67
VPS60Q03390 YSP3YOR003W 1437 nt10.83□□□□□ -0.68
VPS60Q03390 SGT2YOR007C 1041 nt10.8□□□□□ -0.68
VPS60Q03390 UTR1YJR049C 1593 nt10.78□□□□□ -0.68
VPS60Q03390 MAE1YKL029C 2010 nt10.77□□□□□ -0.68
VPS60Q03390 ZRT3YKL175W 1512 nt10.75□□□□□ -0.69
VPS60Q03390 SAM35YHR083W 990 nt10.74□□□□□ -0.69
VPS60Q03390 RTG1YOL067C 534 nt10.74□□□□□ -0.69
VPS60Q03390 HOL1YNR055C 1761 nt10.72□□□□□ -0.69
VPS60Q03390 GAP1YKR039W 1809 nt10.72□□□□□ -0.69
VPS60Q03390 LSC2YGR244C 1284 nt10.71□□□□□ -0.69
VPS60Q03390 TIR3YIL011W 810 nt10.68□□□□□ -0.7
VPS60Q03390 YNL115CYNL115C 1935 nt10.67□□□□□ -0.7
VPS60Q03390 MET2YNL277W 1461 nt10.65□□□□□ -0.7
VPS60Q03390 PRO1YDR300C 1287 nt10.62□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 52.9 ms