Protein–RNA interactions for Protein: P53905

LSM7, U6 snRNA-associated Sm-like protein LSm7, yeastyeast

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM7P53905 WSC2YNL283C 1512 nt9.65□□□□□ -0.86
LSM7P53905 DDR2YOL052C-A 186 nt9.64□□□□□ -0.87
LSM7P53905 TRM5YHR070W 1500 nt9.64□□□□□ -0.87
LSM7P53905 GAL1YBR020W 1587 nt9.63□□□□□ -0.87
LSM7P53905 PBP1YGR178C 2169 nt9.62□□□□□ -0.87
LSM7P53905 YDL086C-AYDL086C-A 435 nt9.61□□□□□ -0.87
LSM7P53905 FRD1YEL047C 1413 nt9.61□□□□□ -0.87
LSM7P53905 CYT2YKL087C 675 nt9.6□□□□□ -0.87
LSM7P53905 BNA2YJR078W 1362 nt9.6□□□□□ -0.87
LSM7P53905 YCL074WYCL074W 927 nt9.58□□□□□ -0.88
LSM7P53905 PUS2YGL063W 1113 nt9.58□□□□□ -0.88
LSM7P53905 YGR259CYGR259C 441 nt9.58□□□□□ -0.88
LSM7P53905 DUS1YML080W 1272 nt9.58□□□□□ -0.88
LSM7P53905 ANP1YEL036C 1503 nt9.57□□□□□ -0.88
LSM7P53905 AGP1YCL025C 1902 nt9.57□□□□□ -0.88
LSM7P53905 IRC24YIR036C 792 nt9.56□□□□□ -0.88
LSM7P53905 DIC1YLR348C 897 nt9.56□□□□□ -0.88
LSM7P53905 MIC12YBR262C 321 nt9.55□□□□□ -0.88
LSM7P53905 ERV46YAL042W 1248 nt9.54□□□□□ -0.88
LSM7P53905 YKR040CYKR040C 504 nt9.54□□□□□ -0.88
LSM7P53905 YPR011CYPR011C 981 nt9.54□□□□□ -0.88
LSM7P53905 LPX1YOR084W 1164 nt9.51□□□□□ -0.89
LSM7P53905 HHO1YPL127C 777 nt9.48□□□□□ -0.89
LSM7P53905 AQY1YPR192W 918 nt9.48□□□□□ -0.89
LSM7P53905 CMP2YML057W 1815 nt9.46□□□□□ -0.9
LSM7P53905 YDR524C-BYDR524C-B 201 nt9.45□□□□□ -0.9
LSM7P53905 FEN2YCR028C 1539 nt9.45□□□□□ -0.9
LSM7P53905 STB1YNL309W 1263 nt9.44□□□□□ -0.9
LSM7P53905 SPC25YER018C 666 nt9.43□□□□□ -0.9
LSM7P53905 RDN18-1RDN18-1 1800 nt9.4□□□□□ -0.91
LSM7P53905 RDN18-2RDN18-2 1800 nt9.4□□□□□ -0.91
LSM7P53905 GPI16YHR188C 1833 nt9.39□□□□□ -0.91
LSM7P53905 XDJ1YLR090W 1380 nt9.38□□□□□ -0.91
LSM7P53905 tM(CAU)CtM(CAU)C 72 nt9.38□□□□□ -0.91
LSM7P53905 IMT4tM(CAU)E 72 nt9.38□□□□□ -0.91
LSM7P53905 IMT3tM(CAU)J3 72 nt9.38□□□□□ -0.91
LSM7P53905 IMT1tM(CAU)O1 72 nt9.38□□□□□ -0.91
LSM7P53905 IMT2tM(CAU)P 72 nt9.38□□□□□ -0.91
LSM7P53905 YIR016WYIR016W 798 nt9.38□□□□□ -0.91
LSM7P53905 STR3YGL184C 1398 nt9.37□□□□□ -0.91
LSM7P53905 YGR201CYGR201C 678 nt9.37□□□□□ -0.91
LSM7P53905 YAT1YAR035W 2064 nt9.35□□□□□ -0.91
LSM7P53905 VPS60YDR486C 690 nt9.33□□□□□ -0.92
LSM7P53905 TIM23YNR017W 669 nt9.31□□□□□ -0.92
LSM7P53905 DUT1YBR252W 444 nt9.31□□□□□ -0.92
LSM7P53905 YLR179CYLR179C 606 nt9.3□□□□□ -0.92
LSM7P53905 NDI1YML120C 1542 nt9.3□□□□□ -0.92
LSM7P53905 CCT4YDL143W 1587 nt9.29□□□□□ -0.92
LSM7P53905 HSL7YBR133C 2484 nt9.29□□□□□ -0.92
LSM7P53905 PTH1YHR189W 573 nt9.28□□□□□ -0.92
LSM7P53905 AQY2YLL052C 450 nt9.28□□□□□ -0.92
LSM7P53905 ALG3YBL082C 1377 nt9.27□□□□□ -0.93
LSM7P53905 RTN2YDL204W 1182 nt9.26□□□□□ -0.93
LSM7P53905 YLR235CYLR235C 399 nt9.25□□□□□ -0.93
LSM7P53905 SWC5YBR231C 912 nt9.25□□□□□ -0.93
LSM7P53905 AHT1YHR093W 549 nt9.22□□□□□ -0.93
LSM7P53905 GOR1YNL274C 1053 nt9.22□□□□□ -0.93
LSM7P53905 AVT6YER119C 1347 nt9.22□□□□□ -0.93
LSM7P53905 GDH3YAL062W 1374 nt9.22□□□□□ -0.93
LSM7P53905 SPT20YOL148C 1815 nt9.19□□□□□ -0.94
LSM7P53905 INA1YLR413W 2028 nt9.12□□□□□ -0.95
LSM7P53905 RPC82YPR190C 1965 nt9.12□□□□□ -0.95
LSM7P53905 YPR064WYPR064W 420 nt9.11□□□□□ -0.95
LSM7P53905 HIF1YLL022C 1158 nt9.1□□□□□ -0.95
LSM7P53905 PLB1YMR008C 1995 nt9.07□□□□□ -0.96
LSM7P53905 SPP1YPL138C 1062 nt9.07□□□□□ -0.96
LSM7P53905 RDN25-1RDN25-1 3396 nt9.07□□□□□ -0.96
LSM7P53905 RDN25-2RDN25-2 3396 nt9.07□□□□□ -0.96
LSM7P53905 YKL030WYKL030W 606 nt9.06□□□□□ -0.96
LSM7P53905 ALD4YOR374W 1560 nt9.06□□□□□ -0.96
LSM7P53905 PRM5YIL117C 957 nt9.04□□□□□ -0.96
LSM7P53905 TAD3YLR316C 969 nt9.04□□□□□ -0.96
LSM7P53905 SHM2YLR058C 1410 nt9.02□□□□□ -0.97
LSM7P53905 HEL2YDR266C 1920 nt9.01□□□□□ -0.97
LSM7P53905 ARP6YLR085C 1317 nt9.01□□□□□ -0.97
LSM7P53905 DAT1YML113W 747 nt8.99□□□□□ -0.97
LSM7P53905 NBP35YGL091C 987 nt8.98□□□□□ -0.97
LSM7P53905 RIM8YGL045W 1629 nt8.97□□□□□ -0.97
LSM7P53905 MOT3YMR070W 1473 nt8.96□□□□□ -0.97
LSM7P53905 BDH1YAL060W 1149 nt8.96□□□□□ -0.98
LSM7P53905 TIM17YJL143W 477 nt8.95□□□□□ -0.98
LSM7P53905 YLR415CYLR415C 339 nt8.94□□□□□ -0.98
LSM7P53905 YCR102CYCR102C 1107 nt8.93□□□□□ -0.98
LSM7P53905 ZRT3YKL175W 1512 nt8.92□□□□□ -0.98
LSM7P53905 MUP1YGR055W 1725 nt8.91□□□□□ -0.98
LSM7P53905 NIT1YIL164C 600 nt8.91□□□□□ -0.98
LSM7P53905 UTR1YJR049C 1593 nt8.9□□□□□ -0.98
LSM7P53905 YGL114WYGL114W 2178 nt8.9□□□□□ -0.98
LSM7P53905 SAM35YHR083W 990 nt8.85□□□□□ -0.99
LSM7P53905 HOL1YNR055C 1761 nt8.84□□□□□ -0.99
LSM7P53905 SGT2YOR007C 1041 nt8.84□□□□□ -0.99
LSM7P53905 YJL067WYJL067W 351 nt8.82□□□□□ -1
LSM7P53905 GAP1YKR039W 1809 nt8.82□□□□□ -1
LSM7P53905 YSP3YOR003W 1437 nt8.8□□□□□ -1
LSM7P53905 LSC2YGR244C 1284 nt8.79□□□□□ -1
LSM7P53905 tL(GAG)GtL(GAG)G 82 nt8.78□□□□□ -1
LSM7P53905 TIR3YIL011W 810 nt8.75□□□□□ -1.01
LSM7P53905 YNL024CYNL024C 741 nt8.74□□□□□ -1.01
LSM7P53905 MAE1YKL029C 2010 nt8.74□□□□□ -1.01
LSM7P53905 ILV3YJR016C 1758 nt8.73□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 31.4 ms