Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 NCP1YHR042W 2076 nt11.07□□□□□ -0.64
CAF120P53836 CWP1YKL096W 720 nt11.06□□□□□ -0.64
CAF120P53836 YLR179CYLR179C 606 nt11.06□□□□□ -0.64
CAF120P53836 TAD3YLR316C 969 nt11.04□□□□□ -0.64
CAF120P53836 YFL066CYFL066C 1179 nt11.03□□□□□ -0.64
CAF120P53836 PCM1YEL058W 1674 nt11.02□□□□□ -0.64
CAF120P53836 ADH2YMR303C 1047 nt11.02□□□□□ -0.65
CAF120P53836 GLK1YCL040W 1503 nt11.02□□□□□ -0.65
CAF120P53836 Q0144Q0144 330 nt11.01□□□□□ -0.65
CAF120P53836 PTK1YKL198C 1989 nt11.01□□□□□ -0.65
CAF120P53836 BUR6YER159C 429 nt11□□□□□ -0.65
CAF120P53836 BMT5YIL096C 1011 nt11□□□□□ -0.65
CAF120P53836 YMR244WYMR244W 1068 nt11□□□□□ -0.65
CAF120P53836 PEX25YPL112C 1185 nt10.96□□□□□ -0.65
CAF120P53836 MSF1YPR047W 1410 nt10.95□□□□□ -0.66
CAF120P53836 AHT1YHR093W 549 nt10.92□□□□□ -0.66
CAF120P53836 YJL225CYJL225C 5277 nt10.92□□□□□ -0.66
CAF120P53836 SIM1YIL123W 1431 nt10.92□□□□□ -0.66
CAF120P53836 WSC2YNL283C 1512 nt10.9□□□□□ -0.66
CAF120P53836 THI74YDR438W 1113 nt10.86□□□□□ -0.67
CAF120P53836 BIO4YNR057C 714 nt10.86□□□□□ -0.67
CAF120P53836 RNQ1YCL028W 1218 nt10.85□□□□□ -0.67
CAF120P53836 GLR1YPL091W 1452 nt10.85□□□□□ -0.67
CAF120P53836 YIH1YCR059C 777 nt10.84□□□□□ -0.67
CAF120P53836 SEM1YDR363W-A 270 nt10.84□□□□□ -0.67
CAF120P53836 YNL115CYNL115C 1935 nt10.84□□□□□ -0.67
CAF120P53836 YSP3YOR003W 1437 nt10.83□□□□□ -0.68
CAF120P53836 UME6YDR207C 2511 nt10.83□□□□□ -0.68
CAF120P53836 MIR1YJR077C 936 nt10.8□□□□□ -0.68
CAF120P53836 Q0010Q0010 387 nt10.8□□□□□ -0.68
CAF120P53836 YFL054CYFL054C 1941 nt10.79□□□□□ -0.68
CAF120P53836 LYS4YDR234W 2082 nt10.78□□□□□ -0.68
CAF120P53836 Q0142Q0142 177 nt10.78□□□□□ -0.68
CAF120P53836 RBG2YGR173W 1107 nt10.78□□□□□ -0.68
CAF120P53836 BDH1YAL060W 1149 nt10.77□□□□□ -0.69
CAF120P53836 YLR415CYLR415C 339 nt10.77□□□□□ -0.69
CAF120P53836 YLL053CYLL053C 459 nt10.76□□□□□ -0.69
CAF120P53836 ERF2YLR246W 1080 nt10.72□□□□□ -0.69
CAF120P53836 AQY1YPR192W 918 nt10.72□□□□□ -0.69
CAF120P53836 YIR018C-AYIR018C-A 138 nt10.71□□□□□ -0.69
CAF120P53836 SPT8YLR055C 1809 nt10.71□□□□□ -0.69
CAF120P53836 Q0017Q0017 162 nt10.71□□□□□ -0.69
CAF120P53836 FTR1YER145C 1215 nt10.69□□□□□ -0.7
CAF120P53836 CRR1YLR213C 1269 nt10.69□□□□□ -0.7
CAF120P53836 VPS75YNL246W 795 nt10.69□□□□□ -0.7
CAF120P53836 SRN2YLR119W 642 nt10.68□□□□□ -0.7
CAF120P53836 DAT1YML113W 747 nt10.68□□□□□ -0.7
CAF120P53836 GAL1YBR020W 1587 nt10.65□□□□□ -0.71
CAF120P53836 YGL034CYGL034C 366 nt10.64□□□□□ -0.71
CAF120P53836 ATF2YGR177C 1608 nt10.62□□□□□ -0.71
CAF120P53836 TRM5YHR070W 1500 nt10.62□□□□□ -0.71
CAF120P53836 YFL067WYFL067W 528 nt10.61□□□□□ -0.71
CAF120P53836 NDI1YML120C 1542 nt10.6□□□□□ -0.71
CAF120P53836 PAU7YAR020C 168 nt10.59□□□□□ -0.71
CAF120P53836 CCT4YDL143W 1587 nt10.59□□□□□ -0.71
CAF120P53836 HEM12YDR047W 1089 nt10.58□□□□□ -0.72
CAF120P53836 DDR2YOL052C-A 186 nt10.58□□□□□ -0.72
CAF120P53836 STB1YNL309W 1263 nt10.57□□□□□ -0.72
CAF120P53836 SPC25YER018C 666 nt10.56□□□□□ -0.72
CAF120P53836 MIC10YCL057C-A 294 nt10.56□□□□□ -0.72
CAF120P53836 RDN37-1RDN37-1 5354 nt10.56□□□□□ -0.72
CAF120P53836 RDN37-2RDN37-2 5354 nt10.56□□□□□ -0.72
CAF120P53836 SWE1YJL187C 2460 nt10.55□□□□□ -0.72
CAF120P53836 YHR056W-AYHR056W-A 435 nt10.55□□□□□ -0.72
CAF120P53836 YMR226CYMR226C 804 nt10.55□□□□□ -0.72
CAF120P53836 SNG1YGR197C 1644 nt10.55□□□□□ -0.72
CAF120P53836 SAM1YLR180W 1149 nt10.54□□□□□ -0.72
CAF120P53836 UBA4YHR111W 1323 nt10.54□□□□□ -0.72
CAF120P53836 RPM1RPM1 483 nt10.53□□□□□ -0.72
CAF120P53836 SWC5YBR231C 912 nt10.52□□□□□ -0.73
CAF120P53836 GPI16YHR188C 1833 nt10.51□□□□□ -0.73
CAF120P53836 YDL086C-AYDL086C-A 435 nt10.51□□□□□ -0.73
CAF120P53836 RBG1YAL036C 1110 nt10.51□□□□□ -0.73
CAF120P53836 YDR524C-BYDR524C-B 201 nt10.5□□□□□ -0.73
CAF120P53836 YSR3YKR053C 1215 nt10.49□□□□□ -0.73
CAF120P53836 ARA2YMR041C 1008 nt10.48□□□□□ -0.73
CAF120P53836 ANP1YEL036C 1503 nt10.47□□□□□ -0.73
CAF120P53836 VPS60YDR486C 690 nt10.46□□□□□ -0.73
CAF120P53836 RAX1YOR301W 1308 nt10.46□□□□□ -0.73
CAF120P53836 AI3Q0060 1248 nt10.45□□□□□ -0.74
CAF120P53836 ARP10YDR106W 855 nt10.45□□□□□ -0.74
CAF120P53836 XYL2YLR070C 1071 nt10.45□□□□□ -0.74
CAF120P53836 AI5_BETAQ0075 1065 nt10.44□□□□□ -0.74
CAF120P53836 SHB17YKR043C 816 nt10.43□□□□□ -0.74
CAF120P53836 FEN2YCR028C 1539 nt10.43□□□□□ -0.74
CAF120P53836 YCR099CYCR099C 468 nt10.42□□□□□ -0.74
CAF120P53836 FRE6YLL051C 2139 nt10.41□□□□□ -0.74
CAF120P53836 ALG3YBL082C 1377 nt10.4□□□□□ -0.74
CAF120P53836 RAD51YER095W 1203 nt10.39□□□□□ -0.75
CAF120P53836 Q0255Q0255 1419 nt10.38□□□□□ -0.75
CAF120P53836 TIM17YJL143W 477 nt10.36□□□□□ -0.75
CAF120P53836 CCA1YER168C 1641 nt10.36□□□□□ -0.75
CAF120P53836 YCR087WYCR087W 516 nt10.35□□□□□ -0.75
CAF120P53836 BNA2YJR078W 1362 nt10.35□□□□□ -0.75
CAF120P53836 YIR016WYIR016W 798 nt10.33□□□□□ -0.76
CAF120P53836 MIC12YBR262C 321 nt10.33□□□□□ -0.76
CAF120P53836 YGL188CYGL188C 174 nt10.31□□□□□ -0.76
CAF120P53836 YOR169CYOR169C 465 nt10.31□□□□□ -0.76
CAF120P53836 AIM45YPR004C 1035 nt10.31□□□□□ -0.76
CAF120P53836 YDR010CYDR010C 333 nt10.3□□□□□ -0.76
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms