Protein–RNA interactions for Protein: P53135

SLD3, DNA replication regulator SLD3, yeastyeast

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLD3P53135 TRM5YHR070W 1500 nt10.18□□□□□ -0.78
SLD3P53135 GAL1YBR020W 1587 nt10.18□□□□□ -0.78
SLD3P53135 ERV46YAL042W 1248 nt10.17□□□□□ -0.78
SLD3P53135 YKR040CYKR040C 504 nt10.17□□□□□ -0.78
SLD3P53135 DDR2YOL052C-A 186 nt10.17□□□□□ -0.78
SLD3P53135 NME1NME1 340 nt10.17□□□□□ -0.78
SLD3P53135 LPX1YOR084W 1164 nt10.15□□□□□ -0.78
SLD3P53135 FRE6YLL051C 2139 nt10.13□□□□□ -0.79
SLD3P53135 YDL086C-AYDL086C-A 435 nt10.13□□□□□ -0.79
SLD3P53135 BMT6YLR063W 1098 nt10.13□□□□□ -0.79
SLD3P53135 DIC1YLR348C 897 nt10.13□□□□□ -0.79
SLD3P53135 BNA2YJR078W 1362 nt10.11□□□□□ -0.79
SLD3P53135 NAR1YNL240C 1476 nt10.1□□□□□ -0.79
SLD3P53135 tM(CAU)CtM(CAU)C 72 nt10.1□□□□□ -0.79
SLD3P53135 IMT4tM(CAU)E 72 nt10.1□□□□□ -0.79
SLD3P53135 IMT3tM(CAU)J3 72 nt10.1□□□□□ -0.79
SLD3P53135 IMT1tM(CAU)O1 72 nt10.1□□□□□ -0.79
SLD3P53135 IMT2tM(CAU)P 72 nt10.1□□□□□ -0.79
SLD3P53135 YKR005CYKR005C 1578 nt10.09□□□□□ -0.79
SLD3P53135 ANP1YEL036C 1503 nt10.07□□□□□ -0.8
SLD3P53135 WSC2YNL283C 1512 nt10.07□□□□□ -0.8
SLD3P53135 DUS1YML080W 1272 nt10.05□□□□□ -0.8
SLD3P53135 SNF1YDR477W 1902 nt10.04□□□□□ -0.8
SLD3P53135 AGP1YCL025C 1902 nt10.04□□□□□ -0.8
SLD3P53135 BIO5YNR056C 1686 nt10.04□□□□□ -0.8
SLD3P53135 MIC12YBR262C 321 nt10.03□□□□□ -0.8
SLD3P53135 YCL074WYCL074W 927 nt10.02□□□□□ -0.81
SLD3P53135 AQY1YPR192W 918 nt10.02□□□□□ -0.81
SLD3P53135 YGR259CYGR259C 441 nt10□□□□□ -0.81
SLD3P53135 YDR524C-BYDR524C-B 201 nt9.99□□□□□ -0.81
SLD3P53135 STB1YNL309W 1263 nt9.98□□□□□ -0.81
SLD3P53135 FEN2YCR028C 1539 nt9.97□□□□□ -0.81
SLD3P53135 HHO1YPL127C 777 nt9.97□□□□□ -0.81
SLD3P53135 SPC25YER018C 666 nt9.96□□□□□ -0.82
SLD3P53135 IRC24YIR036C 792 nt9.95□□□□□ -0.82
SLD3P53135 PBP1YGR178C 2169 nt9.95□□□□□ -0.82
SLD3P53135 GPI16YHR188C 1833 nt9.93□□□□□ -0.82
SLD3P53135 CYT2YKL087C 675 nt9.92□□□□□ -0.82
SLD3P53135 PTH1YHR189W 573 nt9.9□□□□□ -0.82
SLD3P53135 YIR016WYIR016W 798 nt9.89□□□□□ -0.83
SLD3P53135 TIM23YNR017W 669 nt9.89□□□□□ -0.83
SLD3P53135 YLR179CYLR179C 606 nt9.88□□□□□ -0.83
SLD3P53135 VPS60YDR486C 690 nt9.86□□□□□ -0.83
SLD3P53135 XDJ1YLR090W 1380 nt9.86□□□□□ -0.83
SLD3P53135 RDN18-1RDN18-1 1800 nt9.85□□□□□ -0.83
SLD3P53135 RDN18-2RDN18-2 1800 nt9.85□□□□□ -0.83
SLD3P53135 YGR201CYGR201C 678 nt9.85□□□□□ -0.83
SLD3P53135 YLR235CYLR235C 399 nt9.85□□□□□ -0.83
SLD3P53135 CCT4YDL143W 1587 nt9.84□□□□□ -0.83
SLD3P53135 STR3YGL184C 1398 nt9.83□□□□□ -0.84
SLD3P53135 ALG3YBL082C 1377 nt9.81□□□□□ -0.84
SLD3P53135 DUT1YBR252W 444 nt9.8□□□□□ -0.84
SLD3P53135 SWC5YBR231C 912 nt9.79□□□□□ -0.84
SLD3P53135 AHT1YHR093W 549 nt9.78□□□□□ -0.84
SLD3P53135 CMP2YML057W 1815 nt9.75□□□□□ -0.85
SLD3P53135 AQY2YLL052C 450 nt9.75□□□□□ -0.85
SLD3P53135 SPP1YPL138C 1062 nt9.74□□□□□ -0.85
SLD3P53135 AVT6YER119C 1347 nt9.73□□□□□ -0.85
SLD3P53135 GOR1YNL274C 1053 nt9.72□□□□□ -0.85
SLD3P53135 RTN2YDL204W 1182 nt9.7□□□□□ -0.86
SLD3P53135 YPR064WYPR064W 420 nt9.69□□□□□ -0.86
SLD3P53135 YKL030WYKL030W 606 nt9.68□□□□□ -0.86
SLD3P53135 YAT1YAR035W 2064 nt9.68□□□□□ -0.86
SLD3P53135 GDH3YAL062W 1374 nt9.67□□□□□ -0.86
SLD3P53135 TAD3YLR316C 969 nt9.61□□□□□ -0.87
SLD3P53135 NDI1YML120C 1542 nt9.61□□□□□ -0.87
SLD3P53135 SHM2YLR058C 1410 nt9.55□□□□□ -0.88
SLD3P53135 HSL7YBR133C 2484 nt9.53□□□□□ -0.88
SLD3P53135 PLB1YMR008C 1995 nt9.52□□□□□ -0.89
SLD3P53135 BDH1YAL060W 1149 nt9.52□□□□□ -0.89
SLD3P53135 YLR415CYLR415C 339 nt9.51□□□□□ -0.89
SLD3P53135 SPT20YOL148C 1815 nt9.5□□□□□ -0.89
SLD3P53135 TIM17YJL143W 477 nt9.49□□□□□ -0.89
SLD3P53135 HIF1YLL022C 1158 nt9.49□□□□□ -0.89
SLD3P53135 DAT1YML113W 747 nt9.48□□□□□ -0.89
SLD3P53135 ALD4YOR374W 1560 nt9.47□□□□□ -0.89
SLD3P53135 INA1YLR413W 2028 nt9.47□□□□□ -0.89
SLD3P53135 PRM5YIL117C 957 nt9.46□□□□□ -0.9
SLD3P53135 ARP6YLR085C 1317 nt9.46□□□□□ -0.9
SLD3P53135 NBP35YGL091C 987 nt9.45□□□□□ -0.9
SLD3P53135 Q0010Q0010 387 nt9.45□□□□□ -0.9
SLD3P53135 RPC82YPR190C 1965 nt9.44□□□□□ -0.9
SLD3P53135 YCR102CYCR102C 1107 nt9.43□□□□□ -0.9
SLD3P53135 NIT1YIL164C 600 nt9.43□□□□□ -0.9
SLD3P53135 YDR510C-AYDR510C-A 117 nt9.42□□□□□ -0.9
SLD3P53135 MET8YBR213W 825 nt9.42□□□□□ -0.9
SLD3P53135 BSP1YPR171W 1731 nt9.39□□□□□ -0.91
SLD3P53135 YJR154WYJR154W 1041 nt9.39□□□□□ -0.91
SLD3P53135 tL(GAG)GtL(GAG)G 82 nt9.37□□□□□ -0.91
SLD3P53135 SGT2YOR007C 1041 nt9.37□□□□□ -0.91
SLD3P53135 YSP3YOR003W 1437 nt9.37□□□□□ -0.91
SLD3P53135 UTR1YJR049C 1593 nt9.35□□□□□ -0.91
SLD3P53135 RDN25-1RDN25-1 3396 nt9.31□□□□□ -0.92
SLD3P53135 RDN25-2RDN25-2 3396 nt9.31□□□□□ -0.92
SLD3P53135 RTG1YOL067C 534 nt9.3□□□□□ -0.92
SLD3P53135 ZRT3YKL175W 1512 nt9.3□□□□□ -0.92
SLD3P53135 SAM35YHR083W 990 nt9.29□□□□□ -0.92
SLD3P53135 GAP1YKR039W 1809 nt9.28□□□□□ -0.92
SLD3P53135 CLB6YGR109C 1143 nt9.28□□□□□ -0.92
SLD3P53135 LSC2YGR244C 1284 nt9.26□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms