Protein–RNA interactions for Protein: P39702

VPS8, Vacuolar protein sorting-associated protein 8, yeastyeast

Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS8P39702 RRT5YFR032C 870 nt12.56□□□□□ -0.4
VPS8P39702 PRE6YOL038W 765 nt12.56□□□□□ -0.4
VPS8P39702 ERF2YLR246W 1080 nt12.55□□□□□ -0.4
VPS8P39702 NCP1YHR042W 2076 nt12.54□□□□□ -0.4
VPS8P39702 STB1YNL309W 1263 nt12.54□□□□□ -0.4
VPS8P39702 ATF2YGR177C 1608 nt12.54□□□□□ -0.4
VPS8P39702 SPC25YER018C 666 nt12.53□□□□□ -0.4
VPS8P39702 YFL067WYFL067W 528 nt12.51□□□□□ -0.41
VPS8P39702 DDR2YOL052C-A 186 nt12.51□□□□□ -0.41
VPS8P39702 BDH1YAL060W 1149 nt12.5□□□□□ -0.41
VPS8P39702 NVJ2YPR091C 2313 nt12.5□□□□□ -0.41
VPS8P39702 CRR1YLR213C 1269 nt12.49□□□□□ -0.41
VPS8P39702 BOP3YNL042W 1191 nt12.49□□□□□ -0.41
VPS8P39702 CCT4YDL143W 1587 nt12.48□□□□□ -0.41
VPS8P39702 YDR524C-BYDR524C-B 201 nt12.48□□□□□ -0.41
VPS8P39702 GPI16YHR188C 1833 nt12.47□□□□□ -0.41
VPS8P39702 PEX25YPL112C 1185 nt12.47□□□□□ -0.41
VPS8P39702 YSP3YOR003W 1437 nt12.46□□□□□ -0.41
VPS8P39702 YFL066CYFL066C 1179 nt12.46□□□□□ -0.41
VPS8P39702 YLR415CYLR415C 339 nt12.45□□□□□ -0.42
VPS8P39702 YDL086C-AYDL086C-A 435 nt12.44□□□□□ -0.42
VPS8P39702 LYS4YDR234W 2082 nt12.41□□□□□ -0.42
VPS8P39702 VPS60YDR486C 690 nt12.41□□□□□ -0.42
VPS8P39702 YNL115CYNL115C 1935 nt12.41□□□□□ -0.42
VPS8P39702 SWC5YBR231C 912 nt12.4□□□□□ -0.42
VPS8P39702 ANP1YEL036C 1503 nt12.4□□□□□ -0.42
VPS8P39702 FEN2YCR028C 1539 nt12.38□□□□□ -0.43
VPS8P39702 SNG1YGR197C 1644 nt12.37□□□□□ -0.43
VPS8P39702 ALG3YBL082C 1377 nt12.36□□□□□ -0.43
VPS8P39702 HEM12YDR047W 1089 nt12.36□□□□□ -0.43
VPS8P39702 PTK1YKL198C 1989 nt12.36□□□□□ -0.43
VPS8P39702 MIC10YCL057C-A 294 nt12.33□□□□□ -0.44
VPS8P39702 YIR016WYIR016W 798 nt12.26□□□□□ -0.45
VPS8P39702 SBA1YKL117W 651 nt12.25□□□□□ -0.45
VPS8P39702 NAT4YMR069W 858 nt12.25□□□□□ -0.45
VPS8P39702 VPS75YNL246W 795 nt12.25□□□□□ -0.45
VPS8P39702 SPT8YLR055C 1809 nt12.25□□□□□ -0.45
VPS8P39702 GLK1YCL040W 1503 nt12.21□□□□□ -0.45
VPS8P39702 YFL054CYFL054C 1941 nt12.21□□□□□ -0.46
VPS8P39702 MIR1YJR077C 936 nt12.18□□□□□ -0.46
VPS8P39702 YHR056W-AYHR056W-A 435 nt12.16□□□□□ -0.46
VPS8P39702 MSF1YPR047W 1410 nt12.14□□□□□ -0.47
VPS8P39702 THI74YDR438W 1113 nt12.14□□□□□ -0.47
VPS8P39702 TIM17YJL143W 477 nt12.14□□□□□ -0.47
VPS8P39702 BNA2YJR078W 1362 nt12.12□□□□□ -0.47
VPS8P39702 MIC12YBR262C 321 nt12.09□□□□□ -0.47
VPS8P39702 RAX1YOR301W 1308 nt12.08□□□□□ -0.48
VPS8P39702 SHM2YLR058C 1410 nt12.07□□□□□ -0.48
VPS8P39702 BOR1YNL275W 1731 nt12.07□□□□□ -0.48
VPS8P39702 XDJ1YLR090W 1380 nt12.06□□□□□ -0.48
VPS8P39702 PAU7YAR020C 168 nt12.06□□□□□ -0.48
VPS8P39702 DAT1YML113W 747 nt12.01□□□□□ -0.49
VPS8P39702 GDH3YAL062W 1374 nt11.98□□□□□ -0.49
VPS8P39702 YGR201CYGR201C 678 nt11.97□□□□□ -0.49
VPS8P39702 NIT1YIL164C 600 nt11.97□□□□□ -0.49
VPS8P39702 HHO1YPL127C 777 nt11.97□□□□□ -0.49
VPS8P39702 UBA4YHR111W 1323 nt11.96□□□□□ -0.49
VPS8P39702 SHB17YKR043C 816 nt11.96□□□□□ -0.49
VPS8P39702 SGT2YOR007C 1041 nt11.96□□□□□ -0.49
VPS8P39702 YJL225CYJL225C 5277 nt11.91□□□□□ -0.5
VPS8P39702 YGL034CYGL034C 366 nt11.91□□□□□ -0.5
VPS8P39702 YDR010CYDR010C 333 nt11.89□□□□□ -0.51
VPS8P39702 YSR3YKR053C 1215 nt11.89□□□□□ -0.51
VPS8P39702 AVT6YER119C 1347 nt11.86□□□□□ -0.51
VPS8P39702 SWE1YJL187C 2460 nt11.84□□□□□ -0.51
VPS8P39702 RET2YFR051C 1641 nt11.82□□□□□ -0.52
VPS8P39702 CCA1YER168C 1641 nt11.82□□□□□ -0.52
VPS8P39702 XYL2YLR070C 1071 nt11.81□□□□□ -0.52
VPS8P39702 YMR244WYMR244W 1068 nt11.81□□□□□ -0.52
VPS8P39702 GOR1YNL274C 1053 nt11.81□□□□□ -0.52
VPS8P39702 AGP1YCL025C 1902 nt11.8□□□□□ -0.52
VPS8P39702 GLR1YPL091W 1452 nt11.78□□□□□ -0.52
VPS8P39702 PHO89YBR296C 1725 nt11.78□□□□□ -0.52
VPS8P39702 YCR087WYCR087W 516 nt11.77□□□□□ -0.53
VPS8P39702 HSP60YLR259C 1719 nt11.76□□□□□ -0.53
VPS8P39702 NDI1YML120C 1542 nt11.75□□□□□ -0.53
VPS8P39702 RBG1YAL036C 1110 nt11.74□□□□□ -0.53
VPS8P39702 DUT1YBR252W 444 nt11.74□□□□□ -0.53
VPS8P39702 YCR102CYCR102C 1107 nt11.73□□□□□ -0.53
VPS8P39702 AIM45YPR004C 1035 nt11.7□□□□□ -0.54
VPS8P39702 MRP20YDR405W 792 nt11.65□□□□□ -0.54
VPS8P39702 SFA1YDL168W 1161 nt11.64□□□□□ -0.55
VPS8P39702 COQ2YNR041C 1119 nt11.64□□□□□ -0.55
VPS8P39702 UME6YDR207C 2511 nt11.63□□□□□ -0.55
VPS8P39702 RDN37-1RDN37-1 5354 nt11.63□□□□□ -0.55
VPS8P39702 RDN37-2RDN37-2 5354 nt11.63□□□□□ -0.55
VPS8P39702 NBP35YGL091C 987 nt11.59□□□□□ -0.55
VPS8P39702 RBG2YGR173W 1107 nt11.59□□□□□ -0.55
VPS8P39702 DUS1YML080W 1272 nt11.59□□□□□ -0.55
VPS8P39702 YHL019W-AYHL019W-A 594 nt11.58□□□□□ -0.56
VPS8P39702 ALG12YNR030W 1656 nt11.55□□□□□ -0.56
VPS8P39702 FUR4YBR021W 1902 nt11.55□□□□□ -0.56
VPS8P39702 TIR3YIL011W 810 nt11.54□□□□□ -0.56
VPS8P39702 STR3YGL184C 1398 nt11.54□□□□□ -0.56
VPS8P39702 SHH4YLR164W 507 nt11.53□□□□□ -0.56
VPS8P39702 YMR226CYMR226C 804 nt11.52□□□□□ -0.57
VPS8P39702 MCH5YOR306C 1566 nt11.52□□□□□ -0.57
VPS8P39702 RPL4BYDR012W 1089 nt11.51□□□□□ -0.57
VPS8P39702 RPL4AYBR031W 1089 nt11.51□□□□□ -0.57
VPS8P39702 YCL074WYCL074W 927 nt11.5□□□□□ -0.57
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms