Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 YFL067WYFL067W 528 nt8.53□□□□□ -1.04
RPB11P38902 YLL053CYLL053C 459 nt8.53□□□□□ -1.04
RPB11P38902 SNG1YGR197C 1644 nt8.51□□□□□ -1.05
RPB11P38902 MXR2YCL033C 507 nt8.51□□□□□ -1.05
RPB11P38902 ATF2YGR177C 1608 nt8.51□□□□□ -1.05
RPB11P38902 FMP45YDL222C 930 nt8.5□□□□□ -1.05
RPB11P38902 NDI1YML120C 1542 nt8.49□□□□□ -1.05
RPB11P38902 Q0182Q0182 405 nt8.49□□□□□ -1.05
RPB11P38902 DUS1YML080W 1272 nt8.48□□□□□ -1.05
RPB11P38902 FTR1YER145C 1215 nt8.47□□□□□ -1.05
RPB11P38902 PUS2YGL063W 1113 nt8.47□□□□□ -1.05
RPB11P38902 BNA2YJR078W 1362 nt8.47□□□□□ -1.05
RPB11P38902 ERV46YAL042W 1248 nt8.46□□□□□ -1.06
RPB11P38902 FRD1YEL047C 1413 nt8.46□□□□□ -1.06
RPB11P38902 HSL7YBR133C 2484 nt8.45□□□□□ -1.06
RPB11P38902 YKR040CYKR040C 504 nt8.42□□□□□ -1.06
RPB11P38902 GAL1YBR020W 1587 nt8.41□□□□□ -1.06
RPB11P38902 TRM5YHR070W 1500 nt8.41□□□□□ -1.06
RPB11P38902 DDR2YOL052C-A 186 nt8.41□□□□□ -1.06
RPB11P38902 YPR011CYPR011C 981 nt8.41□□□□□ -1.06
RPB11P38902 YDL086C-AYDL086C-A 435 nt8.39□□□□□ -1.07
RPB11P38902 DIC1YLR348C 897 nt8.39□□□□□ -1.07
RPB11P38902 MIC12YBR262C 321 nt8.39□□□□□ -1.07
RPB11P38902 YAT1YAR035W 2064 nt8.39□□□□□ -1.07
RPB11P38902 LPX1YOR084W 1164 nt8.38□□□□□ -1.07
RPB11P38902 ANP1YEL036C 1503 nt8.38□□□□□ -1.07
RPB11P38902 AGP1YCL025C 1902 nt8.37□□□□□ -1.07
RPB11P38902 tM(CAU)CtM(CAU)C 72 nt8.35□□□□□ -1.07
RPB11P38902 IMT4tM(CAU)E 72 nt8.35□□□□□ -1.07
RPB11P38902 IMT3tM(CAU)J3 72 nt8.35□□□□□ -1.07
RPB11P38902 IMT1tM(CAU)O1 72 nt8.35□□□□□ -1.07
RPB11P38902 IMT2tM(CAU)P 72 nt8.35□□□□□ -1.07
RPB11P38902 AQY1YPR192W 918 nt8.35□□□□□ -1.07
RPB11P38902 SPT20YOL148C 1815 nt8.35□□□□□ -1.07
RPB11P38902 HHO1YPL127C 777 nt8.31□□□□□ -1.08
RPB11P38902 RDN25-1RDN25-1 3396 nt8.3□□□□□ -1.08
RPB11P38902 RDN25-2RDN25-2 3396 nt8.3□□□□□ -1.08
RPB11P38902 HEL2YDR266C 1920 nt8.28□□□□□ -1.08
RPB11P38902 INA1YLR413W 2028 nt8.27□□□□□ -1.09
RPB11P38902 SPC25YER018C 666 nt8.27□□□□□ -1.09
RPB11P38902 YDR524C-BYDR524C-B 201 nt8.26□□□□□ -1.09
RPB11P38902 STB1YNL309W 1263 nt8.26□□□□□ -1.09
RPB11P38902 FEN2YCR028C 1539 nt8.25□□□□□ -1.09
RPB11P38902 RTN2YDL204W 1182 nt8.25□□□□□ -1.09
RPB11P38902 YGR201CYGR201C 678 nt8.25□□□□□ -1.09
RPB11P38902 GPI16YHR188C 1833 nt8.24□□□□□ -1.09
RPB11P38902 RDN18-1RDN18-1 1800 nt8.24□□□□□ -1.09
RPB11P38902 RDN18-2RDN18-2 1800 nt8.24□□□□□ -1.09
RPB11P38902 STR3YGL184C 1398 nt8.23□□□□□ -1.09
RPB11P38902 XDJ1YLR090W 1380 nt8.21□□□□□ -1.1
RPB11P38902 YIR016WYIR016W 798 nt8.19□□□□□ -1.1
RPB11P38902 TIM23YNR017W 669 nt8.19□□□□□ -1.1
RPB11P38902 GDH3YAL062W 1374 nt8.19□□□□□ -1.1
RPB11P38902 YLR235CYLR235C 399 nt8.18□□□□□ -1.1
RPB11P38902 RPC82YPR190C 1965 nt8.18□□□□□ -1.1
RPB11P38902 YLR179CYLR179C 606 nt8.17□□□□□ -1.1
RPB11P38902 VPS60YDR486C 690 nt8.16□□□□□ -1.1
RPB11P38902 RIM8YGL045W 1629 nt8.16□□□□□ -1.1
RPB11P38902 CCT4YDL143W 1587 nt8.15□□□□□ -1.1
RPB11P38902 AQY2YLL052C 450 nt8.15□□□□□ -1.1
RPB11P38902 PTH1YHR189W 573 nt8.14□□□□□ -1.11
RPB11P38902 YGL114WYGL114W 2178 nt8.14□□□□□ -1.11
RPB11P38902 AHT1YHR093W 549 nt8.12□□□□□ -1.11
RPB11P38902 ALG3YBL082C 1377 nt8.11□□□□□ -1.11
RPB11P38902 SWC5YBR231C 912 nt8.1□□□□□ -1.11
RPB11P38902 GOR1YNL274C 1053 nt8.09□□□□□ -1.11
RPB11P38902 HIF1YLL022C 1158 nt8.08□□□□□ -1.12
RPB11P38902 ALD4YOR374W 1560 nt8.08□□□□□ -1.12
RPB11P38902 DUT1YBR252W 444 nt8.06□□□□□ -1.12
RPB11P38902 AVT6YER119C 1347 nt8.04□□□□□ -1.12
RPB11P38902 MUP1YGR055W 1725 nt8.03□□□□□ -1.12
RPB11P38902 YPR064WYPR064W 420 nt8.03□□□□□ -1.12
RPB11P38902 MAE1YKL029C 2010 nt8.03□□□□□ -1.12
RPB11P38902 YKL030WYKL030W 606 nt8.01□□□□□ -1.13
RPB11P38902 SPP1YPL138C 1062 nt8□□□□□ -1.13
RPB11P38902 ZRT3YKL175W 1512 nt7.99□□□□□ -1.13
RPB11P38902 MET2YNL277W 1461 nt7.98□□□□□ -1.13
RPB11P38902 TAD3YLR316C 969 nt7.97□□□□□ -1.13
RPB11P38902 PRM5YIL117C 957 nt7.96□□□□□ -1.14
RPB11P38902 PLB1YMR008C 1995 nt7.95□□□□□ -1.14
RPB11P38902 HOL1YNR055C 1761 nt7.95□□□□□ -1.14
RPB11P38902 ARP6YLR085C 1317 nt7.93□□□□□ -1.14
RPB11P38902 SAM35YHR083W 990 nt7.9□□□□□ -1.14
RPB11P38902 DAT1YML113W 747 nt7.9□□□□□ -1.14
RPB11P38902 SSN3YPL042C 1668 nt7.89□□□□□ -1.15
RPB11P38902 SHM2YLR058C 1410 nt7.89□□□□□ -1.15
RPB11P38902 BDH1YAL060W 1149 nt7.89□□□□□ -1.15
RPB11P38902 ACO2YJL200C 2370 nt7.88□□□□□ -1.15
RPB11P38902 YLR415CYLR415C 339 nt7.88□□□□□ -1.15
RPB11P38902 TIM17YJL143W 477 nt7.87□□□□□ -1.15
RPB11P38902 ILV3YJR016C 1758 nt7.86□□□□□ -1.15
RPB11P38902 HIS2YFR025C 1008 nt7.85□□□□□ -1.15
RPB11P38902 NBP35YGL091C 987 nt7.84□□□□□ -1.15
RPB11P38902 YNL024CYNL024C 741 nt7.84□□□□□ -1.15
RPB11P38902 GID7YCL039W 2238 nt7.84□□□□□ -1.15
RPB11P38902 FRE6YLL051C 2139 nt7.84□□□□□ -1.16
RPB11P38902 YJL067WYJL067W 351 nt7.83□□□□□ -1.16
RPB11P38902 MOT3YMR070W 1473 nt7.82□□□□□ -1.16
RPB11P38902 YCR102CYCR102C 1107 nt7.82□□□□□ -1.16
RPB11P38902 NIT1YIL164C 600 nt7.82□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 26.5 ms