Protein–RNA interactions for Protein: P38780

YHR054C, Uncharacterized protein YHR054C, yeastyeast

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YHR054CP38780 DDR2YOL052C-A 186 nt11.62□□□□□ -0.55
YHR054CP38780 YFL067WYFL067W 528 nt11.6□□□□□ -0.55
YHR054CP38780 RRT5YFR032C 870 nt11.6□□□□□ -0.55
YHR054CP38780 PRE6YOL038W 765 nt11.6□□□□□ -0.55
YHR054CP38780 YDR524C-BYDR524C-B 201 nt11.58□□□□□ -0.56
YHR054CP38780 SPC25YER018C 666 nt11.58□□□□□ -0.56
YHR054CP38780 CRR1YLR213C 1269 nt11.58□□□□□ -0.56
YHR054CP38780 NCP1YHR042W 2076 nt11.56□□□□□ -0.56
YHR054CP38780 CCT4YDL143W 1587 nt11.56□□□□□ -0.56
YHR054CP38780 BOP3YNL042W 1191 nt11.56□□□□□ -0.56
YHR054CP38780 BDH1YAL060W 1149 nt11.55□□□□□ -0.56
YHR054CP38780 GPI16YHR188C 1833 nt11.55□□□□□ -0.56
YHR054CP38780 YDL086C-AYDL086C-A 435 nt11.53□□□□□ -0.56
YHR054CP38780 YLR415CYLR415C 339 nt11.53□□□□□ -0.56
YHR054CP38780 RTF1YGL244W 1677 nt11.52□□□□□ -0.56
YHR054CP38780 YFL066CYFL066C 1179 nt11.52□□□□□ -0.57
YHR054CP38780 PEX25YPL112C 1185 nt11.52□□□□□ -0.57
YHR054CP38780 SWC5YBR231C 912 nt11.52□□□□□ -0.57
YHR054CP38780 VPS60YDR486C 690 nt11.5□□□□□ -0.57
YHR054CP38780 YSP3YOR003W 1437 nt11.5□□□□□ -0.57
YHR054CP38780 HEM12YDR047W 1089 nt11.49□□□□□ -0.57
YHR054CP38780 YNL115CYNL115C 1935 nt11.47□□□□□ -0.57
YHR054CP38780 SNG1YGR197C 1644 nt11.47□□□□□ -0.57
YHR054CP38780 FEN2YCR028C 1539 nt11.46□□□□□ -0.57
YHR054CP38780 ANP1YEL036C 1503 nt11.45□□□□□ -0.58
YHR054CP38780 LYS4YDR234W 2082 nt11.45□□□□□ -0.58
YHR054CP38780 MIC10YCL057C-A 294 nt11.45□□□□□ -0.58
YHR054CP38780 ALG3YBL082C 1377 nt11.44□□□□□ -0.58
YHR054CP38780 PIB2YGL023C 1908 nt11.44□□□□□ -0.58
YHR054CP38780 YIR016WYIR016W 798 nt11.36□□□□□ -0.59
YHR054CP38780 NAT4YMR069W 858 nt11.32□□□□□ -0.6
YHR054CP38780 SPT8YLR055C 1809 nt11.32□□□□□ -0.6
YHR054CP38780 GLK1YCL040W 1503 nt11.31□□□□□ -0.6
YHR054CP38780 PTK1YKL198C 1989 nt11.31□□□□□ -0.6
YHR054CP38780 VPS75YNL246W 795 nt11.31□□□□□ -0.6
YHR054CP38780 YHR056W-AYHR056W-A 435 nt11.29□□□□□ -0.6
YHR054CP38780 BNA2YJR078W 1362 nt11.28□□□□□ -0.6
YHR054CP38780 PAC11YDR488C 1602 nt11.27□□□□□ -0.6
YHR054CP38780 TIM17YJL143W 477 nt11.26□□□□□ -0.61
YHR054CP38780 SBA1YKL117W 651 nt11.26□□□□□ -0.61
YHR054CP38780 NVJ2YPR091C 2313 nt11.25□□□□□ -0.61
YHR054CP38780 MIR1YJR077C 936 nt11.24□□□□□ -0.61
YHR054CP38780 RAX1YOR301W 1308 nt11.21□□□□□ -0.61
YHR054CP38780 THI74YDR438W 1113 nt11.21□□□□□ -0.61
YHR054CP38780 PAU7YAR020C 168 nt11.21□□□□□ -0.61
YHR054CP38780 MSF1YPR047W 1410 nt11.2□□□□□ -0.62
YHR054CP38780 YFL054CYFL054C 1941 nt11.2□□□□□ -0.62
YHR054CP38780 XDJ1YLR090W 1380 nt11.19□□□□□ -0.62
YHR054CP38780 MIC12YBR262C 321 nt11.19□□□□□ -0.62
YHR054CP38780 SHM2YLR058C 1410 nt11.18□□□□□ -0.62
YHR054CP38780 HHO1YPL127C 777 nt11.12□□□□□ -0.63
YHR054CP38780 GDH3YAL062W 1374 nt11.12□□□□□ -0.63
YHR054CP38780 DAT1YML113W 747 nt11.1□□□□□ -0.63
YHR054CP38780 YGR201CYGR201C 678 nt11.09□□□□□ -0.63
YHR054CP38780 SGT2YOR007C 1041 nt11.09□□□□□ -0.63
YHR054CP38780 SHB17YKR043C 816 nt11.07□□□□□ -0.64
YHR054CP38780 NIT1YIL164C 600 nt11.06□□□□□ -0.64
YHR054CP38780 UBA4YHR111W 1323 nt11.06□□□□□ -0.64
YHR054CP38780 AVT6YER119C 1347 nt11.03□□□□□ -0.64
YHR054CP38780 YSR3YKR053C 1215 nt11.01□□□□□ -0.65
YHR054CP38780 YGL034CYGL034C 366 nt11□□□□□ -0.65
YHR054CP38780 YDR010CYDR010C 333 nt10.99□□□□□ -0.65
YHR054CP38780 CCA1YER168C 1641 nt10.98□□□□□ -0.65
YHR054CP38780 GOR1YNL274C 1053 nt10.97□□□□□ -0.65
YHR054CP38780 SWE1YJL187C 2460 nt10.95□□□□□ -0.66
YHR054CP38780 XYL2YLR070C 1071 nt10.94□□□□□ -0.66
YHR054CP38780 AGP1YCL025C 1902 nt10.93□□□□□ -0.66
YHR054CP38780 PHO89YBR296C 1725 nt10.92□□□□□ -0.66
YHR054CP38780 RET2YFR051C 1641 nt10.91□□□□□ -0.66
YHR054CP38780 DUT1YBR252W 444 nt10.91□□□□□ -0.66
YHR054CP38780 YCR087WYCR087W 516 nt10.88□□□□□ -0.67
YHR054CP38780 RBG1YAL036C 1110 nt10.88□□□□□ -0.67
YHR054CP38780 NDI1YML120C 1542 nt10.88□□□□□ -0.67
YHR054CP38780 YCR102CYCR102C 1107 nt10.87□□□□□ -0.67
YHR054CP38780 YMR244WYMR244W 1068 nt10.87□□□□□ -0.67
YHR054CP38780 GLR1YPL091W 1452 nt10.86□□□□□ -0.67
YHR054CP38780 DUS1YML080W 1272 nt10.83□□□□□ -0.68
YHR054CP38780 AIM45YPR004C 1035 nt10.82□□□□□ -0.68
YHR054CP38780 MRP20YDR405W 792 nt10.8□□□□□ -0.68
YHR054CP38780 YJL225CYJL225C 5277 nt10.79□□□□□ -0.68
YHR054CP38780 COQ2YNR041C 1119 nt10.77□□□□□ -0.69
YHR054CP38780 SFA1YDL168W 1161 nt10.76□□□□□ -0.69
YHR054CP38780 YHL019W-AYHL019W-A 594 nt10.75□□□□□ -0.69
YHR054CP38780 NBP35YGL091C 987 nt10.72□□□□□ -0.69
YHR054CP38780 AQY2YLL052C 450 nt10.72□□□□□ -0.69
YHR054CP38780 STR3YGL184C 1398 nt10.7□□□□□ -0.7
YHR054CP38780 SHH4YLR164W 507 nt10.69□□□□□ -0.7
YHR054CP38780 YCL074WYCL074W 927 nt10.68□□□□□ -0.7
YHR054CP38780 RBG2YGR173W 1107 nt10.68□□□□□ -0.7
YHR054CP38780 TIR3YIL011W 810 nt10.68□□□□□ -0.7
YHR054CP38780 RDN18-1RDN18-1 1800 nt10.65□□□□□ -0.71
YHR054CP38780 RDN18-2RDN18-2 1800 nt10.65□□□□□ -0.71
YHR054CP38780 RPL4BYDR012W 1089 nt10.64□□□□□ -0.71
YHR054CP38780 RPL4AYBR031W 1089 nt10.64□□□□□ -0.71
YHR054CP38780 TOM6YOR045W 186 nt10.62□□□□□ -0.71
YHR054CP38780 CLB6YGR109C 1143 nt10.61□□□□□ -0.71
YHR054CP38780 YMR226CYMR226C 804 nt10.6□□□□□ -0.71
YHR054CP38780 FUR4YBR021W 1902 nt10.58□□□□□ -0.72
YHR054CP38780 POM34YLR018C 900 nt10.58□□□□□ -0.72
YHR054CP38780 RPS14BYJL191W 417 nt10.57□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms