Protein–RNA interactions for Protein: P38629

RFC3, Replication factor C subunit 3, yeastyeast

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC3P38629 MOT3YMR070W 1473 nt10.9□□□□□ -0.66
RFC3P38629 DIC1YLR348C 897 nt10.9□□□□□ -0.66
RFC3P38629 DDR2YOL052C-A 186 nt10.86□□□□□ -0.67
RFC3P38629 PRP4YPR178W 1398 nt10.86□□□□□ -0.67
RFC3P38629 YDL086C-AYDL086C-A 435 nt10.83□□□□□ -0.68
RFC3P38629 YEL076C-AYEL076C-A 651 nt10.83□□□□□ -0.68
RFC3P38629 YEL076CYEL076C 651 nt10.83□□□□□ -0.68
RFC3P38629 YLR464WYLR464W 651 nt10.83□□□□□ -0.68
RFC3P38629 ANP1YEL036C 1503 nt10.8□□□□□ -0.68
RFC3P38629 DPS1YLL018C 1674 nt10.79□□□□□ -0.68
RFC3P38629 AAC1YMR056C 930 nt10.78□□□□□ -0.68
RFC3P38629 AGP1YCL025C 1902 nt10.77□□□□□ -0.69
RFC3P38629 BNA2YJR078W 1362 nt10.76□□□□□ -0.69
RFC3P38629 MIC12YBR262C 321 nt10.75□□□□□ -0.69
RFC3P38629 YKR005CYKR005C 1578 nt10.73□□□□□ -0.69
RFC3P38629 AQY1YPR192W 918 nt10.73□□□□□ -0.69
RFC3P38629 YDR524C-BYDR524C-B 201 nt10.72□□□□□ -0.69
RFC3P38629 PTH1YHR189W 573 nt10.72□□□□□ -0.69
RFC3P38629 STB1YNL309W 1263 nt10.71□□□□□ -0.69
RFC3P38629 WSC2YNL283C 1512 nt10.7□□□□□ -0.7
RFC3P38629 SNF1YDR477W 1902 nt10.69□□□□□ -0.7
RFC3P38629 BMT6YLR063W 1098 nt10.69□□□□□ -0.7
RFC3P38629 FEN2YCR028C 1539 nt10.68□□□□□ -0.7
RFC3P38629 NAR1YNL240C 1476 nt10.68□□□□□ -0.7
RFC3P38629 SPC25YER018C 666 nt10.68□□□□□ -0.7
RFC3P38629 DUS1YML080W 1272 nt10.68□□□□□ -0.7
RFC3P38629 BIO5YNR056C 1686 nt10.67□□□□□ -0.7
RFC3P38629 YCL074WYCL074W 927 nt10.66□□□□□ -0.7
RFC3P38629 TIM23YNR017W 669 nt10.65□□□□□ -0.7
RFC3P38629 YLR179CYLR179C 606 nt10.63□□□□□ -0.71
RFC3P38629 HHO1YPL127C 777 nt10.63□□□□□ -0.71
RFC3P38629 GPI16YHR188C 1833 nt10.63□□□□□ -0.71
RFC3P38629 YGR259CYGR259C 441 nt10.62□□□□□ -0.71
RFC3P38629 SPP1YPL138C 1062 nt10.62□□□□□ -0.71
RFC3P38629 VPS60YDR486C 690 nt10.61□□□□□ -0.71
RFC3P38629 YLR235CYLR235C 399 nt10.61□□□□□ -0.71
RFC3P38629 YIR016WYIR016W 798 nt10.6□□□□□ -0.71
RFC3P38629 XDJ1YLR090W 1380 nt10.58□□□□□ -0.72
RFC3P38629 ALG3YBL082C 1377 nt10.58□□□□□ -0.72
RFC3P38629 CCT4YDL143W 1587 nt10.56□□□□□ -0.72
RFC3P38629 RDN18-1RDN18-1 1800 nt10.55□□□□□ -0.72
RFC3P38629 RDN18-2RDN18-2 1800 nt10.55□□□□□ -0.72
RFC3P38629 PBP1YGR178C 2169 nt10.55□□□□□ -0.72
RFC3P38629 AHT1YHR093W 549 nt10.54□□□□□ -0.72
RFC3P38629 IRC24YIR036C 792 nt10.53□□□□□ -0.72
RFC3P38629 DUT1YBR252W 444 nt10.53□□□□□ -0.72
RFC3P38629 YGR201CYGR201C 678 nt10.52□□□□□ -0.73
RFC3P38629 SWC5YBR231C 912 nt10.5□□□□□ -0.73
RFC3P38629 CYT2YKL087C 675 nt10.49□□□□□ -0.73
RFC3P38629 STR3YGL184C 1398 nt10.49□□□□□ -0.73
RFC3P38629 YKL030WYKL030W 606 nt10.45□□□□□ -0.74
RFC3P38629 YPR064WYPR064W 420 nt10.42□□□□□ -0.74
RFC3P38629 AQY2YLL052C 450 nt10.41□□□□□ -0.74
RFC3P38629 AVT6YER119C 1347 nt10.39□□□□□ -0.75
RFC3P38629 GOR1YNL274C 1053 nt10.36□□□□□ -0.75
RFC3P38629 TAD3YLR316C 969 nt10.35□□□□□ -0.75
RFC3P38629 GDH3YAL062W 1374 nt10.35□□□□□ -0.75
RFC3P38629 RTN2YDL204W 1182 nt10.33□□□□□ -0.76
RFC3P38629 YAT1YAR035W 2064 nt10.29□□□□□ -0.76
RFC3P38629 BDH1YAL060W 1149 nt10.29□□□□□ -0.76
RFC3P38629 RPM1RPM1 483 nt10.27□□□□□ -0.77
RFC3P38629 SHM2YLR058C 1410 nt10.26□□□□□ -0.77
RFC3P38629 RDN37-1RDN37-1 5354 nt10.26□□□□□ -0.77
RFC3P38629 RDN37-2RDN37-2 5354 nt10.26□□□□□ -0.77
RFC3P38629 CMP2YML057W 1815 nt10.26□□□□□ -0.77
RFC3P38629 YLR415CYLR415C 339 nt10.22□□□□□ -0.77
RFC3P38629 NIT1YIL164C 600 nt10.17□□□□□ -0.78
RFC3P38629 DAT1YML113W 747 nt10.17□□□□□ -0.78
RFC3P38629 PLB1YMR008C 1995 nt10.17□□□□□ -0.78
RFC3P38629 TIM17YJL143W 477 nt10.16□□□□□ -0.78
RFC3P38629 RTG1YOL067C 534 nt10.16□□□□□ -0.78
RFC3P38629 NDI1YML120C 1542 nt10.13□□□□□ -0.79
RFC3P38629 tL(GAG)GtL(GAG)G 82 nt10.13□□□□□ -0.79
RFC3P38629 NBP35YGL091C 987 nt10.13□□□□□ -0.79
RFC3P38629 YSP3YOR003W 1437 nt10.13□□□□□ -0.79
RFC3P38629 PRM5YIL117C 957 nt10.12□□□□□ -0.79
RFC3P38629 HIF1YLL022C 1158 nt10.12□□□□□ -0.79
RFC3P38629 ARP6YLR085C 1317 nt10.1□□□□□ -0.79
RFC3P38629 HSL7YBR133C 2484 nt10.1□□□□□ -0.79
RFC3P38629 SGT2YOR007C 1041 nt10.09□□□□□ -0.79
RFC3P38629 YCR102CYCR102C 1107 nt10.08□□□□□ -0.8
RFC3P38629 ALD4YOR374W 1560 nt10.06□□□□□ -0.8
RFC3P38629 RPC82YPR190C 1965 nt10.03□□□□□ -0.8
RFC3P38629 SPT20YOL148C 1815 nt10.03□□□□□ -0.8
RFC3P38629 UTR1YJR049C 1593 nt10.01□□□□□ -0.81
RFC3P38629 YNL115CYNL115C 1935 nt10□□□□□ -0.81
RFC3P38629 INA1YLR413W 2028 nt9.99□□□□□ -0.81
RFC3P38629 HUA1YGR268C 597 nt9.93□□□□□ -0.82
RFC3P38629 SHH4YLR164W 507 nt9.93□□□□□ -0.82
RFC3P38629 PEX25YPL112C 1185 nt9.93□□□□□ -0.82
RFC3P38629 GAP1YKR039W 1809 nt9.92□□□□□ -0.82
RFC3P38629 FRE6YLL051C 2139 nt9.91□□□□□ -0.82
RFC3P38629 TIR3YIL011W 810 nt9.9□□□□□ -0.82
RFC3P38629 PRO1YDR300C 1287 nt9.88□□□□□ -0.83
RFC3P38629 LSC2YGR244C 1284 nt9.88□□□□□ -0.83
RFC3P38629 YFL066CYFL066C 1179 nt9.87□□□□□ -0.83
RFC3P38629 VPS75YNL246W 795 nt9.87□□□□□ -0.83
RFC3P38629 ZRT3YKL175W 1512 nt9.86□□□□□ -0.83
RFC3P38629 SAM35YHR083W 990 nt9.85□□□□□ -0.83
RFC3P38629 RDN25-1RDN25-1 3396 nt9.83□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms