Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 MIC10YCL057C-A 294 nt9.61□□□□□ -0.87
SSH1P38353 PTH1YHR189W 573 nt9.6□□□□□ -0.87
SSH1P38353 DDR2YOL052C-A 186 nt9.6□□□□□ -0.87
SSH1P38353 AQY1YPR192W 918 nt9.6□□□□□ -0.87
SSH1P38353 YDL086C-AYDL086C-A 435 nt9.56□□□□□ -0.88
SSH1P38353 TIM23YNR017W 669 nt9.56□□□□□ -0.88
SSH1P38353 RAX1YOR301W 1308 nt9.56□□□□□ -0.88
SSH1P38353 ANP1YEL036C 1503 nt9.53□□□□□ -0.88
SSH1P38353 YLR179CYLR179C 606 nt9.52□□□□□ -0.89
SSH1P38353 STB1YNL309W 1263 nt9.51□□□□□ -0.89
SSH1P38353 SPC25YER018C 666 nt9.5□□□□□ -0.89
SSH1P38353 YKL030WYKL030W 606 nt9.49□□□□□ -0.89
SSH1P38353 YDR524C-BYDR524C-B 201 nt9.48□□□□□ -0.89
SSH1P38353 CCA1YER168C 1641 nt9.47□□□□□ -0.89
SSH1P38353 AHT1YHR093W 549 nt9.46□□□□□ -0.9
SSH1P38353 GPI16YHR188C 1833 nt9.46□□□□□ -0.9
SSH1P38353 BNA2YJR078W 1362 nt9.45□□□□□ -0.9
SSH1P38353 FEN2YCR028C 1539 nt9.45□□□□□ -0.9
SSH1P38353 WSC2YNL283C 1512 nt9.44□□□□□ -0.9
SSH1P38353 MIC12YBR262C 321 nt9.43□□□□□ -0.9
SSH1P38353 HSP60YLR259C 1719 nt9.42□□□□□ -0.9
SSH1P38353 YPR064WYPR064W 420 nt9.41□□□□□ -0.9
SSH1P38353 VPS60YDR486C 690 nt9.4□□□□□ -0.9
SSH1P38353 CCT4YDL143W 1587 nt9.4□□□□□ -0.9
SSH1P38353 FUR4YBR021W 1902 nt9.39□□□□□ -0.91
SSH1P38353 GLK1YCL040W 1503 nt9.38□□□□□ -0.91
SSH1P38353 YIR016WYIR016W 798 nt9.37□□□□□ -0.91
SSH1P38353 RTG1YOL067C 534 nt9.37□□□□□ -0.91
SSH1P38353 TAD3YLR316C 969 nt9.35□□□□□ -0.91
SSH1P38353 SWC5YBR231C 912 nt9.34□□□□□ -0.91
SSH1P38353 ALG12YNR030W 1656 nt9.34□□□□□ -0.91
SSH1P38353 ALG3YBL082C 1377 nt9.34□□□□□ -0.91
SSH1P38353 AGP1YCL025C 1902 nt9.31□□□□□ -0.92
SSH1P38353 HHO1YPL127C 777 nt9.31□□□□□ -0.92
SSH1P38353 YGR201CYGR201C 678 nt9.29□□□□□ -0.92
SSH1P38353 SSN3YPL042C 1668 nt9.27□□□□□ -0.93
SSH1P38353 YEL076C-AYEL076C-A 651 nt9.25□□□□□ -0.93
SSH1P38353 YEL076CYEL076C 651 nt9.25□□□□□ -0.93
SSH1P38353 YLR464WYLR464W 651 nt9.25□□□□□ -0.93
SSH1P38353 tL(GAG)GtL(GAG)G 82 nt9.24□□□□□ -0.93
SSH1P38353 DUS1YML080W 1272 nt9.24□□□□□ -0.93
SSH1P38353 PRP4YPR178W 1398 nt9.24□□□□□ -0.93
SSH1P38353 YCL074WYCL074W 927 nt9.23□□□□□ -0.93
SSH1P38353 HUA1YGR268C 597 nt9.23□□□□□ -0.93
SSH1P38353 BDH1YAL060W 1149 nt9.23□□□□□ -0.93
SSH1P38353 MRPL8YJL063C 717 nt9.21□□□□□ -0.94
SSH1P38353 XDJ1YLR090W 1380 nt9.21□□□□□ -0.94
SSH1P38353 YLR415CYLR415C 339 nt9.2□□□□□ -0.94
SSH1P38353 DPS1YLL018C 1674 nt9.18□□□□□ -0.94
SSH1P38353 YKR005CYKR005C 1578 nt9.17□□□□□ -0.94
SSH1P38353 HSL7YBR133C 2484 nt9.16□□□□□ -0.94
SSH1P38353 GDH3YAL062W 1374 nt9.15□□□□□ -0.94
SSH1P38353 ADO1YJR105W 1023 nt9.15□□□□□ -0.94
SSH1P38353 BMT6YLR063W 1098 nt9.15□□□□□ -0.94
SSH1P38353 AAC1YMR056C 930 nt9.15□□□□□ -0.94
SSH1P38353 AVT6YER119C 1347 nt9.13□□□□□ -0.95
SSH1P38353 GOR1YNL274C 1053 nt9.13□□□□□ -0.95
SSH1P38353 YSP3YOR003W 1437 nt9.13□□□□□ -0.95
SSH1P38353 DUT1YBR252W 444 nt9.12□□□□□ -0.95
SSH1P38353 STR3YGL184C 1398 nt9.12□□□□□ -0.95
SSH1P38353 RDN18-1RDN18-1 1800 nt9.11□□□□□ -0.95
SSH1P38353 RDN18-2RDN18-2 1800 nt9.11□□□□□ -0.95
SSH1P38353 YGR259CYGR259C 441 nt9.11□□□□□ -0.95
SSH1P38353 SHM2YLR058C 1410 nt9.11□□□□□ -0.95
SSH1P38353 GID7YCL039W 2238 nt9.11□□□□□ -0.95
SSH1P38353 TIM17YJL143W 477 nt9.09□□□□□ -0.95
SSH1P38353 HEL2YDR266C 1920 nt9.09□□□□□ -0.95
SSH1P38353 SFP1YLR403W 2052 nt9.05□□□□□ -0.96
SSH1P38353 NPP1YCR026C 2229 nt9.05□□□□□ -0.96
SSH1P38353 NAR1YNL240C 1476 nt9.04□□□□□ -0.96
SSH1P38353 MET2YNL277W 1461 nt9.04□□□□□ -0.96
SSH1P38353 IRC24YIR036C 792 nt9.04□□□□□ -0.96
SSH1P38353 FRE6YLL051C 2139 nt9.04□□□□□ -0.96
SSH1P38353 AQY2YLL052C 450 nt9.03□□□□□ -0.96
SSH1P38353 DAT1YML113W 747 nt9.03□□□□□ -0.96
SSH1P38353 YNL115CYNL115C 1935 nt9.03□□□□□ -0.96
SSH1P38353 YAT1YAR035W 2064 nt9.03□□□□□ -0.96
SSH1P38353 SNF1YDR477W 1902 nt9.02□□□□□ -0.97
SSH1P38353 NIT1YIL164C 600 nt9.02□□□□□ -0.97
SSH1P38353 PEX25YPL112C 1185 nt9.02□□□□□ -0.97
SSH1P38353 RDN25-1RDN25-1 3396 nt8.99□□□□□ -0.97
SSH1P38353 RDN25-2RDN25-2 3396 nt8.99□□□□□ -0.97
SSH1P38353 RTN2YDL204W 1182 nt8.99□□□□□ -0.97
SSH1P38353 SGT2YOR007C 1041 nt8.97□□□□□ -0.97
SSH1P38353 BIO5YNR056C 1686 nt8.97□□□□□ -0.97
SSH1P38353 VPS75YNL246W 795 nt8.96□□□□□ -0.98
SSH1P38353 CMP2YML057W 1815 nt8.96□□□□□ -0.98
SSH1P38353 YCR102CYCR102C 1107 nt8.95□□□□□ -0.98
SSH1P38353 YFR018CYFR018C 1092 nt8.94□□□□□ -0.98
SSH1P38353 YFL066CYFL066C 1179 nt8.93□□□□□ -0.98
SSH1P38353 NBP35YGL091C 987 nt8.93□□□□□ -0.98
SSH1P38353 ESBP6YNL125C 2022 nt8.89□□□□□ -0.99
SSH1P38353 ARP6YLR085C 1317 nt8.87□□□□□ -0.99
SSH1P38353 PBP1YGR178C 2169 nt8.87□□□□□ -0.99
SSH1P38353 PLB1YMR008C 1995 nt8.84□□□□□ -0.99
SSH1P38353 CYT2YKL087C 675 nt8.83□□□□□ -1
SSH1P38353 BSP1YPR171W 1731 nt8.83□□□□□ -1
SSH1P38353 PRE6YOL038W 765 nt8.82□□□□□ -1
SSH1P38353 YDR094WYDR094W 336 nt8.81□□□□□ -1
SSH1P38353 TIR3YIL011W 810 nt8.8□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 53 ms