Protein–RNA interactions for Protein: P38235

YBR053C, Uncharacterized protein YBR053C, yeast

Predictions only

Length 358 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
YBR053C	P38235	DDR2	YOL052C-A	186 nt		11.35	□□□□□ -0.59
YBR053C	P38235	STB1	YNL309W	1263 nt		11.33	□□□□□ -0.6
YBR053C	P38235	SPC25	YER018C	666 nt		11.32	□□□□□ -0.6
YBR053C	P38235	YFL067W	YFL067W	528 nt		11.32	□□□□□ -0.6
YBR053C	P38235	LYS4	YDR234W	2082 nt		11.31	□□□□□ -0.6
YBR053C	P38235	YFR018C	YFR018C	1092 nt		11.3	□□□□□ -0.6
YBR053C	P38235	CRR1	YLR213C	1269 nt		11.29	□□□□□ -0.6
YBR053C	P38235	YDL086C-A	YDL086C-A	435 nt		11.28	□□□□□ -0.6
YBR053C	P38235	YDR524C-B	YDR524C-B	201 nt		11.28	□□□□□ -0.6
YBR053C	P38235	CCT4	YDL143W	1587 nt		11.28	□□□□□ -0.6
YBR053C	P38235	BDH1	YAL060W	1149 nt		11.25	□□□□□ -0.61
YBR053C	P38235	PRE6	YOL038W	765 nt		11.24	□□□□□ -0.61
YBR053C	P38235	GPI16	YHR188C	1833 nt		11.23	□□□□□ -0.61
YBR053C	P38235	HEM12	YDR047W	1089 nt		11.22	□□□□□ -0.61
YBR053C	P38235	VPS60	YDR486C	690 nt		11.22	□□□□□ -0.61
YBR053C	P38235	YFL015W-A	YFL015W-A	318 nt		11.22	□□□□□ -0.61
YBR053C	P38235	YFL066C	YFL066C	1179 nt		11.22	□□□□□ -0.61
YBR053C	P38235	SNG1	YGR197C	1644 nt		11.22	□□□□□ -0.61
YBR053C	P38235	MIC10	YCL057C-A	294 nt		11.22	□□□□□ -0.61
YBR053C	P38235	PTK1	YKL198C	1989 nt		11.21	□□□□□ -0.61
YBR053C	P38235	FEN2	YCR028C	1539 nt		11.21	□□□□□ -0.61
YBR053C	P38235	ANP1	YEL036C	1503 nt		11.21	□□□□□ -0.61
YBR053C	P38235	YSP3	YOR003W	1437 nt		11.2	□□□□□ -0.62
YBR053C	P38235	PAU16	YKL224C	372 nt		11.2	□□□□□ -0.62
YBR053C	P38235	RRT5	YFR032C	870 nt		11.19	□□□□□ -0.62
YBR053C	P38235	YLR415C	YLR415C	339 nt		11.18	□□□□□ -0.62
YBR053C	P38235	SWC5	YBR231C	912 nt		11.18	□□□□□ -0.62
YBR053C	P38235	ALG3	YBL082C	1377 nt		11.17	□□□□□ -0.62
YBR053C	P38235	PEX25	YPL112C	1185 nt		11.15	□□□□□ -0.62
YBR053C	P38235	YNL115C	YNL115C	1935 nt		11.14	□□□□□ -0.63
YBR053C	P38235	YIR016W	YIR016W	798 nt		11.12	□□□□□ -0.63
YBR053C	P38235	YFL054C	YFL054C	1941 nt		11.04	□□□□□ -0.64
YBR053C	P38235	PAC11	YDR488C	1602 nt		11.03	□□□□□ -0.64
YBR053C	P38235	YHR056W-A	YHR056W-A	435 nt		11.03	□□□□□ -0.64
YBR053C	P38235	SPT8	YLR055C	1809 nt		11.02	□□□□□ -0.64
YBR053C	P38235	BNA2	YJR078W	1362 nt		10.99	□□□□□ -0.65
YBR053C	P38235	RAX1	YOR301W	1308 nt		10.98	□□□□□ -0.65
YBR053C	P38235	VPS75	YNL246W	795 nt		10.97	□□□□□ -0.65
YBR053C	P38235	MIC12	YBR262C	321 nt		10.95	□□□□□ -0.66
YBR053C	P38235	TIM17	YJL143W	477 nt		10.92	□□□□□ -0.66
YBR053C	P38235	NAT4	YMR069W	858 nt		10.92	□□□□□ -0.66
YBR053C	P38235	GLK1	YCL040W	1503 nt		10.91	□□□□□ -0.66
YBR053C	P38235	SHM2	YLR058C	1410 nt		10.91	□□□□□ -0.66
YBR053C	P38235	XDJ1	YLR090W	1380 nt		10.9	□□□□□ -0.66
YBR053C	P38235	HHO1	YPL127C	777 nt		10.9	□□□□□ -0.66
YBR053C	P38235	MIR1	YJR077C	936 nt		10.89	□□□□□ -0.67
YBR053C	P38235	NVJ2	YPR091C	2313 nt		10.87	□□□□□ -0.67
YBR053C	P38235	GDH3	YAL062W	1374 nt		10.87	□□□□□ -0.67
YBR053C	P38235	THI74	YDR438W	1113 nt		10.85	□□□□□ -0.67
YBR053C	P38235	SBA1	YKL117W	651 nt		10.84	□□□□□ -0.67
YBR053C	P38235	PAU7	YAR020C	168 nt		10.83	□□□□□ -0.68
YBR053C	P38235	MSF1	YPR047W	1410 nt		10.83	□□□□□ -0.68
YBR053C	P38235	YGR201C	YGR201C	678 nt		10.81	□□□□□ -0.68
YBR053C	P38235	NIT1	YIL164C	600 nt		10.81	□□□□□ -0.68
YBR053C	P38235	SGT2	YOR007C	1041 nt		10.79	□□□□□ -0.68
YBR053C	P38235	SWE1	YJL187C	2460 nt		10.78	□□□□□ -0.68
YBR053C	P38235	CCA1	YER168C	1641 nt		10.77	□□□□□ -0.68
YBR053C	P38235	DAT1	YML113W	747 nt		10.76	□□□□□ -0.69
YBR053C	P38235	AVT6	YER119C	1347 nt		10.75	□□□□□ -0.69
YBR053C	P38235	AGP1	YCL025C	1902 nt		10.74	□□□□□ -0.69
YBR053C	P38235	SHB17	YKR043C	816 nt		10.73	□□□□□ -0.69
YBR053C	P38235	UBA4	YHR111W	1323 nt		10.73	□□□□□ -0.69
YBR053C	P38235	GOR1	YNL274C	1053 nt		10.72	□□□□□ -0.69
YBR053C	P38235	DUT1	YBR252W	444 nt		10.71	□□□□□ -0.69
YBR053C	P38235	YDR010C	YDR010C	333 nt		10.7	□□□□□ -0.7
YBR053C	P38235	YGL034C	YGL034C	366 nt		10.67	□□□□□ -0.7
YBR053C	P38235	YSR3	YKR053C	1215 nt		10.65	□□□□□ -0.7
YBR053C	P38235	XYL2	YLR070C	1071 nt		10.62	□□□□□ -0.71
YBR053C	P38235	YCR102C	YCR102C	1107 nt		10.6	□□□□□ -0.71
YBR053C	P38235	RET2	YFR051C	1641 nt		10.59	□□□□□ -0.71
YBR053C	P38235	PHO89	YBR296C	1725 nt		10.59	□□□□□ -0.71
YBR053C	P38235	DUS1	YML080W	1272 nt		10.57	□□□□□ -0.72
YBR053C	P38235	RBG1	YAL036C	1110 nt		10.53	□□□□□ -0.72
YBR053C	P38235	STR3	YGL184C	1398 nt		10.52	□□□□□ -0.72
YBR053C	P38235	NBP35	YGL091C	987 nt		10.51	□□□□□ -0.73
YBR053C	P38235	NDI1	YML120C	1542 nt		10.51	□□□□□ -0.73
YBR053C	P38235	SFA1	YDL168W	1161 nt		10.5	□□□□□ -0.73
YBR053C	P38235	YMR244W	YMR244W	1068 nt		10.5	□□□□□ -0.73
YBR053C	P38235	YCR087W	YCR087W	516 nt		10.49	□□□□□ -0.73
YBR053C	P38235	AQY2	YLL052C	450 nt		10.48	□□□□□ -0.73
YBR053C	P38235	COQ2	YNR041C	1119 nt		10.48	□□□□□ -0.73
YBR053C	P38235	RDN18-1	RDN18-1	1800 nt		10.48	□□□□□ -0.73
YBR053C	P38235	RDN18-2	RDN18-2	1800 nt		10.48	□□□□□ -0.73
YBR053C	P38235	GLR1	YPL091W	1452 nt		10.48	□□□□□ -0.73
YBR053C	P38235	YCL074W	YCL074W	927 nt		10.47	□□□□□ -0.73
YBR053C	P38235	MRP20	YDR405W	792 nt		10.47	□□□□□ -0.73
YBR053C	P38235	AIM45	YPR004C	1035 nt		10.46	□□□□□ -0.73
YBR053C	P38235	SHH4	YLR164W	507 nt		10.45	□□□□□ -0.74
YBR053C	P38235	YHL019W-A	YHL019W-A	594 nt		10.44	□□□□□ -0.74
YBR053C	P38235	FUR4	YBR021W	1902 nt		10.42	□□□□□ -0.74
YBR053C	P38235	TIR3	YIL011W	810 nt		10.41	□□□□□ -0.74
YBR053C	P38235	TOM6	YOR045W	186 nt		10.36	□□□□□ -0.75
YBR053C	P38235	POM34	YLR018C	900 nt		10.35	□□□□□ -0.75
YBR053C	P38235	RPL4B	YDR012W	1089 nt		10.32	□□□□□ -0.76
YBR053C	P38235	PRO1	YDR300C	1287 nt		10.32	□□□□□ -0.76
YBR053C	P38235	RPL4A	YBR031W	1089 nt		10.32	□□□□□ -0.76
YBR053C	P38235	LSC2	YGR244C	1284 nt		10.31	□□□□□ -0.76
YBR053C	P38235	YJL225C	YJL225C	5277 nt		10.31	□□□□□ -0.76
YBR053C	P38235	PEX2	YJL210W	816 nt		10.3	□□□□□ -0.76
YBR053C	P38235	CLB6	YGR109C	1143 nt		10.29	□□□□□ -0.76

Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms