Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 SNG1YGR197C 1644 nt9.88□□□□□ -0.83 RIP-Chip
PUB1P32588 MRPL8YJL063C 717 nt9.87□□□□□ -0.83
PUB1P32588 RAX1YOR301W 1308 nt9.86□□□□□ -0.83 RIP-Chip
PUB1P32588 GAL1YBR020W 1587 nt9.86□□□□□ -0.83
PUB1P32588 TRM5YHR070W 1500 nt9.86□□□□□ -0.83
PUB1P32588 DDR2YOL052C-A 186 nt9.84□□□□□ -0.83 RIP-Chip
PUB1P32588 GLK1YCL040W 1503 nt9.82□□□□□ -0.84
PUB1P32588 ARO7YPR060C 771 nt9.82□□□□□ -0.84
PUB1P32588 CCA1YER168C 1641 nt9.82□□□□□ -0.84
PUB1P32588 RTG1YOL067C 534 nt9.8□□□□□ -0.84
PUB1P32588 FUR4YBR021W 1902 nt9.8□□□□□ -0.84 RIP-Chip
PUB1P32588 YDL086C-AYDL086C-A 435 nt9.79□□□□□ -0.84
PUB1P32588 YEL076C-AYEL076C-A 651 nt9.78□□□□□ -0.84
PUB1P32588 YEL076CYEL076C 651 nt9.78□□□□□ -0.84
PUB1P32588 YLR464WYLR464W 651 nt9.78□□□□□ -0.84
PUB1P32588 AQY1YPR192W 918 nt9.78□□□□□ -0.84
PUB1P32588 PTH1YHR189W 573 nt9.75□□□□□ -0.85
PUB1P32588 ANP1YEL036C 1503 nt9.75□□□□□ -0.85
PUB1P32588 BNA2YJR078W 1362 nt9.75□□□□□ -0.85
PUB1P32588 ADO1YJR105W 1023 nt9.74□□□□□ -0.85
PUB1P32588 YLR235CYLR235C 399 nt9.73□□□□□ -0.85
PUB1P32588 YDR524C-BYDR524C-B 201 nt9.71□□□□□ -0.86 RIP-Chip
PUB1P32588 PAM17YKR065C 594 nt9.71□□□□□ -0.86
PUB1P32588 TIM23YNR017W 669 nt9.71□□□□□ -0.86
PUB1P32588 STB1YNL309W 1263 nt9.7□□□□□ -0.86
PUB1P32588 YLR179CYLR179C 606 nt9.69□□□□□ -0.86
PUB1P32588 SPC25YER018C 666 nt9.68□□□□□ -0.86 RIP-Chip
PUB1P32588 MIC12YBR262C 321 nt9.67□□□□□ -0.86 RIP-Chip
PUB1P32588 GPI16YHR188C 1833 nt9.67□□□□□ -0.86
PUB1P32588 FEN2YCR028C 1539 nt9.66□□□□□ -0.86
PUB1P32588 PRP4YPR178W 1398 nt9.65□□□□□ -0.86
PUB1P32588 ALG12YNR030W 1656 nt9.65□□□□□ -0.86 RIP-Chip
PUB1P32588 UBX6YJL048C 1191 nt9.64□□□□□ -0.87 RIP-Chip
PUB1P32588 DUS1YML080W 1272 nt9.61□□□□□ -0.87
PUB1P32588 AGP1YCL025C 1902 nt9.6□□□□□ -0.87 RIP-Chip
PUB1P32588 HHO1YPL127C 777 nt9.6□□□□□ -0.87 RIP-Chip
PUB1P32588 DPS1YLL018C 1674 nt9.6□□□□□ -0.87
PUB1P32588 UME6YDR207C 2511 nt9.59□□□□□ -0.87
PUB1P32588 VPS60YDR486C 690 nt9.59□□□□□ -0.87 RIP-Chip
PUB1P32588 BMT6YLR063W 1098 nt9.59□□□□□ -0.87 RIP-Chip
PUB1P32588 AAC1YMR056C 930 nt9.59□□□□□ -0.87 RIP-Chip
PUB1P32588 WSC2YNL283C 1512 nt9.59□□□□□ -0.87 RIP-Chip
PUB1P32588 CCT4YDL143W 1587 nt9.58□□□□□ -0.88
PUB1P32588 AHT1YHR093W 549 nt9.58□□□□□ -0.88
PUB1P32588 YIR016WYIR016W 798 nt9.58□□□□□ -0.88
PUB1P32588 YCL074WYCL074W 927 nt9.57□□□□□ -0.88
PUB1P32588 YKL030WYKL030W 606 nt9.57□□□□□ -0.88
PUB1P32588 YKR005CYKR005C 1578 nt9.56□□□□□ -0.88
PUB1P32588 SWC5YBR231C 912 nt9.56□□□□□ -0.88
PUB1P32588 HUA1YGR268C 597 nt9.55□□□□□ -0.88
PUB1P32588 REG2YBR050C 1017 nt9.55□□□□□ -0.88
PUB1P32588 YPR064WYPR064W 420 nt9.54□□□□□ -0.88
PUB1P32588 ALG3YBL082C 1377 nt9.53□□□□□ -0.88
PUB1P32588 YGR201CYGR201C 678 nt9.53□□□□□ -0.88
PUB1P32588 MCH5YOR306C 1566 nt9.5□□□□□ -0.89 RIP-Chip
PUB1P32588 YGR259CYGR259C 441 nt9.48□□□□□ -0.89
PUB1P32588 XDJ1YLR090W 1380 nt9.47□□□□□ -0.89 RIP-Chip
PUB1P32588 YDR094WYDR094W 336 nt9.46□□□□□ -0.9
PUB1P32588 TAD3YLR316C 969 nt9.46□□□□□ -0.9
PUB1P32588 SNF1YDR477W 1902 nt9.43□□□□□ -0.9
PUB1P32588 IRC24YIR036C 792 nt9.41□□□□□ -0.9
PUB1P32588 BIO5YNR056C 1686 nt9.41□□□□□ -0.9
PUB1P32588 NAR1YNL240C 1476 nt9.4□□□□□ -0.9
PUB1P32588 RDN18-1RDN18-1 1800 nt9.4□□□□□ -0.9
PUB1P32588 RDN18-2RDN18-2 1800 nt9.4□□□□□ -0.9
PUB1P32588 STR3YGL184C 1398 nt9.39□□□□□ -0.91
PUB1P32588 AVT6YER119C 1347 nt9.39□□□□□ -0.91 RIP-Chip
PUB1P32588 BUR6YER159C 429 nt9.39□□□□□ -0.91
PUB1P32588 GOR1YNL274C 1053 nt9.39□□□□□ -0.91
PUB1P32588 DUT1YBR252W 444 nt9.39□□□□□ -0.91
PUB1P32588 GDH3YAL062W 1374 nt9.37□□□□□ -0.91
PUB1P32588 AQY2YLL052C 450 nt9.35□□□□□ -0.91
PUB1P32588 YLR415CYLR415C 339 nt9.34□□□□□ -0.91
PUB1P32588 YFL015W-AYFL015W-A 318 nt9.33□□□□□ -0.92
PUB1P32588 BDH1YAL060W 1149 nt9.33□□□□□ -0.92
PUB1P32588 tL(GAG)GtL(GAG)G 82 nt9.31□□□□□ -0.92
PUB1P32588 RTN2YDL204W 1182 nt9.3□□□□□ -0.92 RIP-Chip
PUB1P32588 SHM2YLR058C 1410 nt9.3□□□□□ -0.92
PUB1P32588 YDR509WYDR509W 348 nt9.29□□□□□ -0.92
PUB1P32588 PBP1YGR178C 2169 nt9.29□□□□□ -0.92
PUB1P32588 BMT5YIL096C 1011 nt9.28□□□□□ -0.92
PUB1P32588 TIM17YJL143W 477 nt9.28□□□□□ -0.92 RIP-Chip
PUB1P32588 CYT2YKL087C 675 nt9.27□□□□□ -0.93 RIP-Chip
PUB1P32588 Q0010Q0010 387 nt9.25□□□□□ -0.93
PUB1P32588 DAT1YML113W 747 nt9.21□□□□□ -0.94
PUB1P32588 YSP3YOR003W 1437 nt9.21□□□□□ -0.94
PUB1P32588 VAR1Q0140 1197 nt9.2□□□□□ -0.94
PUB1P32588 YFR018CYFR018C 1092 nt9.19□□□□□ -0.94
PUB1P32588 PAU16YKL224C 372 nt9.19□□□□□ -0.94
PUB1P32588 PRE6YOL038W 765 nt9.19□□□□□ -0.94
PUB1P32588 NIT1YIL164C 600 nt9.18□□□□□ -0.94
PUB1P32588 YCR102CYCR102C 1107 nt9.15□□□□□ -0.94
PUB1P32588 ARA2YMR041C 1008 nt9.15□□□□□ -0.94 RIP-Chip
PUB1P32588 Q0144Q0144 330 nt9.14□□□□□ -0.95
PUB1P32588 SGT2YOR007C 1041 nt9.14□□□□□ -0.95
PUB1P32588 NBP35YGL091C 987 nt9.13□□□□□ -0.95
PUB1P32588 PLB1YMR008C 1995 nt9.12□□□□□ -0.95 RIP-Chip
PUB1P32588 YNL115CYNL115C 1935 nt9.12□□□□□ -0.95
PUB1P32588 RRT5YFR032C 870 nt9.1□□□□□ -0.95
PUB1P32588 PEX25YPL112C 1185 nt9.1□□□□□ -0.95
Retrieved 100 of 7,029 protein–RNA pairs in 10.3 ms