Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 HSP60YLR259C 1719 nt10□□□□□ -0.81
PRP28P23394 HEM12YDR047W 1089 nt9.99□□□□□ -0.81
PRP28P23394 TIM23YNR017W 669 nt9.98□□□□□ -0.81
PRP28P23394 YHR056W-AYHR056W-A 435 nt9.97□□□□□ -0.81
PRP28P23394 TRM5YHR070W 1500 nt9.97□□□□□ -0.81
PRP28P23394 YKL030WYKL030W 606 nt9.96□□□□□ -0.82
PRP28P23394 DDR2YOL052C-A 186 nt9.95□□□□□ -0.82
PRP28P23394 SNG1YGR197C 1644 nt9.94□□□□□ -0.82
PRP28P23394 YLR179CYLR179C 606 nt9.93□□□□□ -0.82
PRP28P23394 YDL086C-AYDL086C-A 435 nt9.92□□□□□ -0.82
PRP28P23394 MIC10YCL057C-A 294 nt9.91□□□□□ -0.82
PRP28P23394 RAX1YOR301W 1308 nt9.89□□□□□ -0.83
PRP28P23394 SPC25YER018C 666 nt9.89□□□□□ -0.83
PRP28P23394 STB1YNL309W 1263 nt9.89□□□□□ -0.83
PRP28P23394 ANP1YEL036C 1503 nt9.88□□□□□ -0.83
PRP28P23394 RTG1YOL067C 534 nt9.88□□□□□ -0.83
PRP28P23394 AHT1YHR093W 549 nt9.87□□□□□ -0.83
PRP28P23394 GLK1YCL040W 1503 nt9.86□□□□□ -0.83
PRP28P23394 GPI16YHR188C 1833 nt9.85□□□□□ -0.83
PRP28P23394 YDR524C-BYDR524C-B 201 nt9.85□□□□□ -0.83
PRP28P23394 WSC2YNL283C 1512 nt9.85□□□□□ -0.83
PRP28P23394 YPR064WYPR064W 420 nt9.84□□□□□ -0.83
PRP28P23394 MRPL8YJL063C 717 nt9.8□□□□□ -0.84
PRP28P23394 FEN2YCR028C 1539 nt9.8□□□□□ -0.84
PRP28P23394 SSN3YPL042C 1668 nt9.8□□□□□ -0.84
PRP28P23394 BNA2YJR078W 1362 nt9.79□□□□□ -0.84
PRP28P23394 YEL076C-AYEL076C-A 651 nt9.79□□□□□ -0.84
PRP28P23394 YEL076CYEL076C 651 nt9.79□□□□□ -0.84
PRP28P23394 YLR464WYLR464W 651 nt9.79□□□□□ -0.84
PRP28P23394 FUR4YBR021W 1902 nt9.79□□□□□ -0.84
PRP28P23394 CCT4YDL143W 1587 nt9.79□□□□□ -0.84
PRP28P23394 MIC12YBR262C 321 nt9.78□□□□□ -0.84
PRP28P23394 TAD3YLR316C 969 nt9.77□□□□□ -0.85
PRP28P23394 CCA1YER168C 1641 nt9.77□□□□□ -0.85
PRP28P23394 VPS60YDR486C 690 nt9.76□□□□□ -0.85
PRP28P23394 BSP1YPR171W 1731 nt9.73□□□□□ -0.85
PRP28P23394 NAR1YNL240C 1476 nt9.73□□□□□ -0.85
PRP28P23394 HUA1YGR268C 597 nt9.73□□□□□ -0.85
PRP28P23394 ADO1YJR105W 1023 nt9.73□□□□□ -0.85
PRP28P23394 NME1NME1 340 nt9.73□□□□□ -0.85
PRP28P23394 SWC5YBR231C 912 nt9.73□□□□□ -0.85
PRP28P23394 YIR016WYIR016W 798 nt9.71□□□□□ -0.86
PRP28P23394 tL(GAG)GtL(GAG)G 82 nt9.7□□□□□ -0.86
PRP28P23394 ALG3YBL082C 1377 nt9.69□□□□□ -0.86
PRP28P23394 YGR201CYGR201C 678 nt9.66□□□□□ -0.86
PRP28P23394 PRP4YPR178W 1398 nt9.65□□□□□ -0.86
PRP28P23394 HHO1YPL127C 777 nt9.64□□□□□ -0.87
PRP28P23394 BDH1YAL060W 1149 nt9.63□□□□□ -0.87
PRP28P23394 YLR415CYLR415C 339 nt9.62□□□□□ -0.87
PRP28P23394 DPS1YLL018C 1674 nt9.61□□□□□ -0.87
PRP28P23394 AAC1YMR056C 930 nt9.61□□□□□ -0.87
PRP28P23394 BMT6YLR063W 1098 nt9.59□□□□□ -0.87
PRP28P23394 AGP1YCL025C 1902 nt9.58□□□□□ -0.88
PRP28P23394 YCL074WYCL074W 927 nt9.58□□□□□ -0.88
PRP28P23394 DUS1YML080W 1272 nt9.58□□□□□ -0.88
PRP28P23394 XDJ1YLR090W 1380 nt9.55□□□□□ -0.88
PRP28P23394 YSP3YOR003W 1437 nt9.55□□□□□ -0.88
PRP28P23394 HSL7YBR133C 2484 nt9.54□□□□□ -0.88
PRP28P23394 BIO5YNR056C 1686 nt9.54□□□□□ -0.88
PRP28P23394 YKR005CYKR005C 1578 nt9.53□□□□□ -0.88
PRP28P23394 SNF1YDR477W 1902 nt9.52□□□□□ -0.88
PRP28P23394 PBP1YGR178C 2169 nt9.52□□□□□ -0.89
PRP28P23394 CYT2YKL087C 675 nt9.52□□□□□ -0.89
PRP28P23394 UBX6YJL048C 1191 nt9.5□□□□□ -0.89
PRP28P23394 TIM17YJL143W 477 nt9.49□□□□□ -0.89
PRP28P23394 GDH3YAL062W 1374 nt9.49□□□□□ -0.89
PRP28P23394 CMP2YML057W 1815 nt9.48□□□□□ -0.89
PRP28P23394 YGR259CYGR259C 441 nt9.47□□□□□ -0.89
PRP28P23394 PEX25YPL112C 1185 nt9.47□□□□□ -0.89
PRP28P23394 SHM2YLR058C 1410 nt9.47□□□□□ -0.89
PRP28P23394 AVT6YER119C 1347 nt9.46□□□□□ -0.9
PRP28P23394 GOR1YNL274C 1053 nt9.45□□□□□ -0.9
PRP28P23394 GID7YCL039W 2238 nt9.45□□□□□ -0.9
PRP28P23394 RDN25-1RDN25-1 3396 nt9.44□□□□□ -0.9
PRP28P23394 RDN25-2RDN25-2 3396 nt9.44□□□□□ -0.9
PRP28P23394 YNL115CYNL115C 1935 nt9.43□□□□□ -0.9
PRP28P23394 YFR018CYFR018C 1092 nt9.42□□□□□ -0.9
PRP28P23394 IRC24YIR036C 792 nt9.42□□□□□ -0.9
PRP28P23394 DAT1YML113W 747 nt9.41□□□□□ -0.9
PRP28P23394 STR3YGL184C 1398 nt9.4□□□□□ -0.9
PRP28P23394 VPS75YNL246W 795 nt9.4□□□□□ -0.9
PRP28P23394 DUT1YBR252W 444 nt9.39□□□□□ -0.91
PRP28P23394 NIT1YIL164C 600 nt9.38□□□□□ -0.91
PRP28P23394 RDN18-1RDN18-1 1800 nt9.36□□□□□ -0.91
PRP28P23394 RDN18-2RDN18-2 1800 nt9.36□□□□□ -0.91
PRP28P23394 AQY2YLL052C 450 nt9.35□□□□□ -0.91
PRP28P23394 YDR094WYDR094W 336 nt9.34□□□□□ -0.91
PRP28P23394 SGT2YOR007C 1041 nt9.33□□□□□ -0.92
PRP28P23394 RTN2YDL204W 1182 nt9.32□□□□□ -0.92
PRP28P23394 YFL066CYFL066C 1179 nt9.32□□□□□ -0.92
PRP28P23394 YCR102CYCR102C 1107 nt9.31□□□□□ -0.92
PRP28P23394 ESBP6YNL125C 2022 nt9.26□□□□□ -0.93
PRP28P23394 RRT5YFR032C 870 nt9.26□□□□□ -0.93
PRP28P23394 NBP35YGL091C 987 nt9.25□□□□□ -0.93
PRP28P23394 PRE6YOL038W 765 nt9.25□□□□□ -0.93
PRP28P23394 HEL2YDR266C 1920 nt9.25□□□□□ -0.93
PRP28P23394 NPP1YCR026C 2229 nt9.23□□□□□ -0.93
PRP28P23394 NDI1YML120C 1542 nt9.23□□□□□ -0.93
PRP28P23394 YAT1YAR035W 2064 nt9.23□□□□□ -0.93
PRP28P23394 SFP1YLR403W 2052 nt9.22□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 11.2 ms