Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 RBG2YGR173W 1107 nt17.33■□□□□ 0.37
TY2B-LR1P0C2J3 AQY1YPR192W 918 nt17.33■□□□□ 0.36
TY2B-LR1P0C2J3 YDR524C-BYDR524C-B 201 nt17.32■□□□□ 0.36
TY2B-LR1P0C2J3 SWC5YBR231C 912 nt17.32■□□□□ 0.36
TY2B-LR1P0C2J3 ATF2YGR177C 1608 nt17.31■□□□□ 0.36
TY2B-LR1P0C2J3 YMR090WYMR090W 684 nt17.3■□□□□ 0.36
TY2B-LR1P0C2J3 CCT4YDL143W 1587 nt17.27■□□□□ 0.36
TY2B-LR1P0C2J3 RRT12YCR045C 1476 nt17.25■□□□□ 0.35
TY2B-LR1P0C2J3 ALG3YBL082C 1377 nt17.22■□□□□ 0.35
TY2B-LR1P0C2J3 DAT1YML113W 747 nt17.2■□□□□ 0.34
TY2B-LR1P0C2J3 STB1YNL309W 1263 nt17.2■□□□□ 0.34
TY2B-LR1P0C2J3 SPC25YER018C 666 nt17.2■□□□□ 0.34
TY2B-LR1P0C2J3 YBR220CYBR220C 1683 nt17.19■□□□□ 0.34
TY2B-LR1P0C2J3 NDI1YML120C 1542 nt17.19■□□□□ 0.34
TY2B-LR1P0C2J3 VPS60YDR486C 690 nt17.17■□□□□ 0.34
TY2B-LR1P0C2J3 GPI16YHR188C 1833 nt17.15■□□□□ 0.34
TY2B-LR1P0C2J3 SIM1YIL123W 1431 nt17.14■□□□□ 0.33
TY2B-LR1P0C2J3 RAD51YER095W 1203 nt17.14■□□□□ 0.33
TY2B-LR1P0C2J3 YNL195CYNL195C 786 nt17.13■□□□□ 0.33
TY2B-LR1P0C2J3 SPT8YLR055C 1809 nt17.11■□□□□ 0.33
TY2B-LR1P0C2J3 DDR2YOL052C-A 186 nt17.1■□□□□ 0.33
TY2B-LR1P0C2J3 RBG1YAL036C 1110 nt17.08■□□□□ 0.33
TY2B-LR1P0C2J3 YGL034CYGL034C 366 nt17.05■□□□□ 0.32
TY2B-LR1P0C2J3 PAU7YAR020C 168 nt17.05■□□□□ 0.32
TY2B-LR1P0C2J3 UBA4YHR111W 1323 nt17.05■□□□□ 0.32
TY2B-LR1P0C2J3 SHB17YKR043C 816 nt17.05■□□□□ 0.32
TY2B-LR1P0C2J3 YFL067WYFL067W 528 nt17.02■□□□□ 0.31
TY2B-LR1P0C2J3 XYL2YLR070C 1071 nt17■□□□□ 0.31
TY2B-LR1P0C2J3 CRR1YLR213C 1269 nt17■□□□□ 0.31
TY2B-LR1P0C2J3 SSA4YER103W 1929 nt16.99■□□□□ 0.31
TY2B-LR1P0C2J3 YHL050CYHL050C 2094 nt16.97■□□□□ 0.31
TY2B-LR1P0C2J3 ERF2YLR246W 1080 nt16.92■□□□□ 0.3
TY2B-LR1P0C2J3 YDL086C-AYDL086C-A 435 nt16.92■□□□□ 0.3
TY2B-LR1P0C2J3 TIM17YJL143W 477 nt16.92■□□□□ 0.3
TY2B-LR1P0C2J3 MIC10YCL057C-A 294 nt16.92■□□□□ 0.3
TY2B-LR1P0C2J3 ANP1YEL036C 1503 nt16.91■□□□□ 0.3
TY2B-LR1P0C2J3 YDR010CYDR010C 333 nt16.9■□□□□ 0.3
TY2B-LR1P0C2J3 SGT2YOR007C 1041 nt16.88■□□□□ 0.29
TY2B-LR1P0C2J3 FEN2YCR028C 1539 nt16.83■□□□□ 0.29
TY2B-LR1P0C2J3 YSR3YKR053C 1215 nt16.77■□□□□ 0.28
TY2B-LR1P0C2J3 SAM1YLR180W 1149 nt16.75■□□□□ 0.27
TY2B-LR1P0C2J3 AIM45YPR004C 1035 nt16.75■□□□□ 0.27
TY2B-LR1P0C2J3 SNG1YGR197C 1644 nt16.74■□□□□ 0.27
TY2B-LR1P0C2J3 SHM2YLR058C 1410 nt16.73■□□□□ 0.27
TY2B-LR1P0C2J3 RPM1RPM1 483 nt16.71■□□□□ 0.27
TY2B-LR1P0C2J3 PHO89YBR296C 1725 nt16.69■□□□□ 0.26
TY2B-LR1P0C2J3 RET2YFR051C 1641 nt16.69■□□□□ 0.26
TY2B-LR1P0C2J3 YIR016WYIR016W 798 nt16.66■□□□□ 0.26
TY2B-LR1P0C2J3 NIT1YIL164C 600 nt16.65■□□□□ 0.26
TY2B-LR1P0C2J3 CAB5YDR196C 726 nt16.63■□□□□ 0.25
TY2B-LR1P0C2J3 YNR029CYNR029C 1290 nt16.62■□□□□ 0.25
TY2B-LR1P0C2J3 XDJ1YLR090W 1380 nt16.61■□□□□ 0.25
TY2B-LR1P0C2J3 SDH5YOL071W 489 nt16.56■□□□□ 0.24
TY2B-LR1P0C2J3 ADH7YCR105W 1086 nt16.54■□□□□ 0.24
TY2B-LR1P0C2J3 COQ2YNR041C 1119 nt16.54■□□□□ 0.24
TY2B-LR1P0C2J3 HEM12YDR047W 1089 nt16.54■□□□□ 0.24
TY2B-LR1P0C2J3 YLR111WYLR111W 333 nt16.53■□□□□ 0.24
TY2B-LR1P0C2J3 YCR087WYCR087W 516 nt16.49■□□□□ 0.23
TY2B-LR1P0C2J3 YLR349WYLR349W 507 nt16.49■□□□□ 0.23
TY2B-LR1P0C2J3 YLR279WYLR279W 390 nt16.45■□□□□ 0.22
TY2B-LR1P0C2J3 LYS4YDR234W 2082 nt16.44■□□□□ 0.22
TY2B-LR1P0C2J3 YMR226CYMR226C 804 nt16.43■□□□□ 0.22
TY2B-LR1P0C2J3 STE4YOR212W 1272 nt16.36■□□□□ 0.21
TY2B-LR1P0C2J3 PAU15YIR041W 375 nt16.35■□□□□ 0.21
TY2B-LR1P0C2J3 SFA1YDL168W 1161 nt16.32■□□□□ 0.2
TY2B-LR1P0C2J3 YHL019W-AYHL019W-A 594 nt16.32■□□□□ 0.2
TY2B-LR1P0C2J3 GDH3YAL062W 1374 nt16.31■□□□□ 0.2
TY2B-LR1P0C2J3 MRP20YDR405W 792 nt16.3■□□□□ 0.2
TY2B-LR1P0C2J3 RPS14BYJL191W 417 nt16.29■□□□□ 0.2
TY2B-LR1P0C2J3 YLR437C-AYLR437C-A 228 nt16.29■□□□□ 0.2
TY2B-LR1P0C2J3 MIC12YBR262C 321 nt16.26■□□□□ 0.19
TY2B-LR1P0C2J3 YGR201CYGR201C 678 nt16.24■□□□□ 0.19
TY2B-LR1P0C2J3 NCP1YHR042W 2076 nt16.24■□□□□ 0.19
TY2B-LR1P0C2J3 AVT6YER119C 1347 nt16.19■□□□□ 0.18
TY2B-LR1P0C2J3 BNA2YJR078W 1362 nt16.18■□□□□ 0.18
TY2B-LR1P0C2J3 SEC11YIR022W 504 nt16.15■□□□□ 0.18
TY2B-LR1P0C2J3 RPL4BYDR012W 1089 nt16.12■□□□□ 0.17
TY2B-LR1P0C2J3 RPL4AYBR031W 1089 nt16.12■□□□□ 0.17
TY2B-LR1P0C2J3 YGR012WYGR012W 1182 nt16.08■□□□□ 0.17
TY2B-LR1P0C2J3 YHR056W-AYHR056W-A 435 nt16.07■□□□□ 0.16
TY2B-LR1P0C2J3 HHO1YPL127C 777 nt16.05■□□□□ 0.16
TY2B-LR1P0C2J3 PCH2YBR186W 1695 nt16.05■□□□□ 0.16
TY2B-LR1P0C2J3 FUN14YAL008W 597 nt16.05■□□□□ 0.16
TY2B-LR1P0C2J3 SHH4YLR164W 507 nt16.05■□□□□ 0.16
TY2B-LR1P0C2J3 RAD23YEL037C 1197 nt16.04■□□□□ 0.16
TY2B-LR1P0C2J3 GPN2YOR262W 1044 nt16■□□□□ 0.15
TY2B-LR1P0C2J3 MSB4YOL112W 1479 nt15.96■□□□□ 0.15
TY2B-LR1P0C2J3 AGP1YCL025C 1902 nt15.96■□□□□ 0.15
TY2B-LR1P0C2J3 tS(GCU)LtS(GCU)L 80 nt15.95■□□□□ 0.14
TY2B-LR1P0C2J3 DUT1YBR252W 444 nt15.95■□□□□ 0.14
TY2B-LR1P0C2J3 BDF1YLR399C 2061 nt15.95■□□□□ 0.14
TY2B-LR1P0C2J3 BOP3YNL042W 1191 nt15.94■□□□□ 0.14
TY2B-LR1P0C2J3 PEX2YJL210W 816 nt15.92■□□□□ 0.14
TY2B-LR1P0C2J3 TAT1YBR069C 1860 nt15.92■□□□□ 0.14
TY2B-LR1P0C2J3 ADH1YOL086C 1047 nt15.91■□□□□ 0.14
TY2B-LR1P0C2J3 TSC10YBR265W 963 nt15.9■□□□□ 0.14
TY2B-LR1P0C2J3 RTF1YGL244W 1677 nt15.9■□□□□ 0.14
TY2B-LR1P0C2J3 TOM6YOR045W 186 nt15.87■□□□□ 0.13
TY2B-LR1P0C2J3 NRT1YOR071C 1797 nt15.87■□□□□ 0.13
TY2B-LR1P0C2J3 YJL195CYJL195C 702 nt15.86■□□□□ 0.13
Retrieved 100 of 7,029 protein–RNA pairs in 24.3 ms