Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 VPS75YNL246W 795 nt17.09■□□□□ 0.33
TY1B-HO13535 SWC5YBR231C 912 nt17.07■□□□□ 0.32
TY1B-HO13535 AQY1YPR192W 918 nt17.07■□□□□ 0.32
TY1B-HO13535 YDR524C-BYDR524C-B 201 nt17.06■□□□□ 0.32
TY1B-HO13535 YMR090WYMR090W 684 nt17.05■□□□□ 0.32
TY1B-HO13535 ATF2YGR177C 1608 nt17.04■□□□□ 0.32
TY1B-HO13535 CCT4YDL143W 1587 nt17.01■□□□□ 0.31
TY1B-HO13535 RRT12YCR045C 1476 nt16.98■□□□□ 0.31
TY1B-HO13535 DAT1YML113W 747 nt16.95■□□□□ 0.3
TY1B-HO13535 ALG3YBL082C 1377 nt16.95■□□□□ 0.3
TY1B-HO13535 NDI1YML120C 1542 nt16.95■□□□□ 0.3
TY1B-HO13535 STB1YNL309W 1263 nt16.94■□□□□ 0.3
TY1B-HO13535 SPC25YER018C 666 nt16.93■□□□□ 0.3
TY1B-HO13535 VPS60YDR486C 690 nt16.91■□□□□ 0.3
TY1B-HO13535 GPI16YHR188C 1833 nt16.9■□□□□ 0.3
TY1B-HO13535 YBR220CYBR220C 1683 nt16.9■□□□□ 0.3
TY1B-HO13535 RAD51YER095W 1203 nt16.89■□□□□ 0.29
TY1B-HO13535 SIM1YIL123W 1431 nt16.88■□□□□ 0.29
TY1B-HO13535 YNL195CYNL195C 786 nt16.88■□□□□ 0.29
TY1B-HO13535 DDR2YOL052C-A 186 nt16.86■□□□□ 0.29
TY1B-HO13535 SPT8YLR055C 1809 nt16.86■□□□□ 0.29
TY1B-HO13535 RBG1YAL036C 1110 nt16.85■□□□□ 0.29
TY1B-HO13535 PAU7YAR020C 168 nt16.83■□□□□ 0.28
TY1B-HO13535 YGL034CYGL034C 366 nt16.81■□□□□ 0.28
TY1B-HO13535 UBA4YHR111W 1323 nt16.8■□□□□ 0.28
TY1B-HO13535 SHB17YKR043C 816 nt16.79■□□□□ 0.28
TY1B-HO13535 XYL2YLR070C 1071 nt16.75■□□□□ 0.27
TY1B-HO13535 YFL067WYFL067W 528 nt16.74■□□□□ 0.27
TY1B-HO13535 CRR1YLR213C 1269 nt16.72■□□□□ 0.27
TY1B-HO13535 SSA4YER103W 1929 nt16.69■□□□□ 0.26
TY1B-HO13535 YHL050CYHL050C 2094 nt16.68■□□□□ 0.26
TY1B-HO13535 TIM17YJL143W 477 nt16.68■□□□□ 0.26
TY1B-HO13535 YDL086C-AYDL086C-A 435 nt16.66■□□□□ 0.26
TY1B-HO13535 ERF2YLR246W 1080 nt16.66■□□□□ 0.26
TY1B-HO13535 MIC10YCL057C-A 294 nt16.64■□□□□ 0.25
TY1B-HO13535 ANP1YEL036C 1503 nt16.64■□□□□ 0.25
TY1B-HO13535 YDR010CYDR010C 333 nt16.64■□□□□ 0.25
TY1B-HO13535 SGT2YOR007C 1041 nt16.62■□□□□ 0.25
TY1B-HO13535 FEN2YCR028C 1539 nt16.58■□□□□ 0.24
TY1B-HO13535 YSR3YKR053C 1215 nt16.54■□□□□ 0.24
TY1B-HO13535 SAM1YLR180W 1149 nt16.51■□□□□ 0.23
TY1B-HO13535 AIM45YPR004C 1035 nt16.51■□□□□ 0.23
TY1B-HO13535 RPM1RPM1 483 nt16.49■□□□□ 0.23
TY1B-HO13535 SHM2YLR058C 1410 nt16.49■□□□□ 0.23
TY1B-HO13535 SNG1YGR197C 1644 nt16.47■□□□□ 0.23
TY1B-HO13535 PHO89YBR296C 1725 nt16.46■□□□□ 0.23
TY1B-HO13535 RET2YFR051C 1641 nt16.43■□□□□ 0.22
TY1B-HO13535 YIR016WYIR016W 798 nt16.41■□□□□ 0.22
TY1B-HO13535 NIT1YIL164C 600 nt16.39■□□□□ 0.21
TY1B-HO13535 YNR029CYNR029C 1290 nt16.39■□□□□ 0.21
TY1B-HO13535 CAB5YDR196C 726 nt16.36■□□□□ 0.21
TY1B-HO13535 XDJ1YLR090W 1380 nt16.36■□□□□ 0.21
TY1B-HO13535 SDH5YOL071W 489 nt16.35■□□□□ 0.21
TY1B-HO13535 ADH7YCR105W 1086 nt16.33■□□□□ 0.2
TY1B-HO13535 YLR111WYLR111W 333 nt16.31■□□□□ 0.2
TY1B-HO13535 COQ2YNR041C 1119 nt16.3■□□□□ 0.2
TY1B-HO13535 HEM12YDR047W 1089 nt16.29■□□□□ 0.2
TY1B-HO13535 YCR087WYCR087W 516 nt16.26■□□□□ 0.19
TY1B-HO13535 YLR349WYLR349W 507 nt16.25■□□□□ 0.19
TY1B-HO13535 YLR279WYLR279W 390 nt16.22■□□□□ 0.19
TY1B-HO13535 YMR226CYMR226C 804 nt16.21■□□□□ 0.18
TY1B-HO13535 LYS4YDR234W 2082 nt16.16■□□□□ 0.18
TY1B-HO13535 PAU15YIR041W 375 nt16.14■□□□□ 0.17
TY1B-HO13535 STE4YOR212W 1272 nt16.13■□□□□ 0.17
TY1B-HO13535 MRP20YDR405W 792 nt16.08■□□□□ 0.17
TY1B-HO13535 YHL019W-AYHL019W-A 594 nt16.08■□□□□ 0.16
TY1B-HO13535 GDH3YAL062W 1374 nt16.07■□□□□ 0.16
TY1B-HO13535 SFA1YDL168W 1161 nt16.06■□□□□ 0.16
TY1B-HO13535 RPS14BYJL191W 417 nt16.05■□□□□ 0.16
TY1B-HO13535 YLR437C-AYLR437C-A 228 nt16.05■□□□□ 0.16
TY1B-HO13535 YGR201CYGR201C 678 nt16■□□□□ 0.15
TY1B-HO13535 MIC12YBR262C 321 nt16■□□□□ 0.15
TY1B-HO13535 AVT6YER119C 1347 nt15.95■□□□□ 0.14
TY1B-HO13535 NCP1YHR042W 2076 nt15.95■□□□□ 0.14
TY1B-HO13535 BNA2YJR078W 1362 nt15.95■□□□□ 0.14
TY1B-HO13535 RPL4BYDR012W 1089 nt15.88■□□□□ 0.13
TY1B-HO13535 SEC11YIR022W 504 nt15.88■□□□□ 0.13
TY1B-HO13535 RPL4AYBR031W 1089 nt15.88■□□□□ 0.13
TY1B-HO13535 YGR012WYGR012W 1182 nt15.85■□□□□ 0.13
TY1B-HO13535 FUN14YAL008W 597 nt15.83■□□□□ 0.12
TY1B-HO13535 HHO1YPL127C 777 nt15.82■□□□□ 0.12
TY1B-HO13535 RAD23YEL037C 1197 nt15.82■□□□□ 0.12
TY1B-HO13535 YHR056W-AYHR056W-A 435 nt15.8■□□□□ 0.12
TY1B-HO13535 SHH4YLR164W 507 nt15.79■□□□□ 0.12
TY1B-HO13535 GPN2YOR262W 1044 nt15.79■□□□□ 0.12
TY1B-HO13535 PCH2YBR186W 1695 nt15.79■□□□□ 0.12
TY1B-HO13535 tS(GCU)LtS(GCU)L 80 nt15.75■□□□□ 0.11
TY1B-HO13535 MSB4YOL112W 1479 nt15.72■□□□□ 0.11
TY1B-HO13535 AGP1YCL025C 1902 nt15.69■□□□□ 0.1
TY1B-HO13535 ADH1YOL086C 1047 nt15.69■□□□□ 0.1
TY1B-HO13535 DUT1YBR252W 444 nt15.69■□□□□ 0.1
TY1B-HO13535 PEX2YJL210W 816 nt15.68■□□□□ 0.1
TY1B-HO13535 BOP3YNL042W 1191 nt15.68■□□□□ 0.1
TY1B-HO13535 TSC10YBR265W 963 nt15.68■□□□□ 0.1
TY1B-HO13535 BDF1YLR399C 2061 nt15.65■□□□□ 0.1
TY1B-HO13535 NRT1YOR071C 1797 nt15.64■□□□□ 0.09
TY1B-HO13535 RTF1YGL244W 1677 nt15.64■□□□□ 0.09
TY1B-HO13535 YJL195CYJL195C 702 nt15.64■□□□□ 0.09
TY1B-HO13535 TOM6YOR045W 186 nt15.64■□□□□ 0.09
TY1B-HO13535 TAT1YBR069C 1860 nt15.63■□□□□ 0.09
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms