Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 AC137630.3-201ENST00000607245 391 ntBASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV1A0A0A0MS02 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.31■□□□□ 0.2
TRGV1A0A0A0MS02 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 KRT125P-201ENST00000546827 989 ntBASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 DUSP8P5-201ENST00000422884 1815 ntBASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRGV1A0A0A0MS02 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV1A0A0A0MS02 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 SNX5-217ENST00000606557 1087 ntBASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV1A0A0A0MS02 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV1A0A0A0MS02 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV1A0A0A0MS02 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRGV1A0A0A0MS02 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.27■□□□□ 0.2
TRGV1A0A0A0MS02 ANOS2P-203ENST00000472227 1816 ntBASIC16.27■□□□□ 0.2
TRGV1A0A0A0MS02 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV1A0A0A0MS02 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRGV1A0A0A0MS02 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.27■□□□□ 0.2
TRGV1A0A0A0MS02 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV1A0A0A0MS02 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRGV1A0A0A0MS02 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRGV1A0A0A0MS02 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRGV1A0A0A0MS02 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms