Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 YIL030W-AYIL030W-A 339 nt5.79□□□□□ -1.48
TY1A-LR2P0CX72 FIG1YBR040W 897 nt5.79□□□□□ -1.48
TY1A-LR2P0CX72 snR3snR3 194 nt5.79□□□□□ -1.48
TY1A-LR2P0CX72 RRP7YCL031C 894 nt5.79□□□□□ -1.48
TY1A-LR2P0CX72 YDR444WYDR444W 2064 nt5.79□□□□□ -1.48
TY1A-LR2P0CX72 BI3Q0115 1554 nt5.79□□□□□ -1.48
TY1A-LR2P0CX72 HRB1YNL004W 1365 nt5.79□□□□□ -1.48
TY1A-LR2P0CX72 TYR1YBR166C 1359 nt5.79□□□□□ -1.48
TY1A-LR2P0CX72 SPR3YGR059W 1539 nt5.79□□□□□ -1.48
TY1A-LR2P0CX72 OSM1YJR051W 1506 nt5.79□□□□□ -1.48
TY1A-LR2P0CX72 GYP8YFL027C 1494 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 PET100YDR079W 336 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 RPL27AYHR010W 411 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 UTP9YHR196W 1728 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 MDE1YJR024C 735 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 PRS1YKL181W 1284 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 SEC17YBL050W 879 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 TRM13YOL125W 1431 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 YPR145C-AYPR145C-A 237 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 TRS20YBR254C 528 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 EAR1YMR171C 1653 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 BCS1YDR375C 1371 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 FBP26YJL155C 1359 nt5.78□□□□□ -1.48
TY1A-LR2P0CX72 CBP1YJL209W 1965 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 HMLALPHA2YCL067C 633 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 RVS161YCR009C 798 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 MATALPHA2YCR039C 633 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 TGL2YDR058C 981 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 YER010CYER010C 705 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 YER133W-AYER133W-A 342 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 TYS1YGR185C 1185 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 YMR158C-AYMR158C-A 138 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 YOR111WYOR111W 699 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 TMA16YOR252W 537 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 HNT3YOR258W 654 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 RPS6AYPL090C 711 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 SEC62YPL094C 825 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 USV1YPL230W 1176 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 FDH2YPL275W 711 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 ARR3YPR201W 1215 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 RXT2YBR095C 1293 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 RPS6BYBR181C 711 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 PFK2YMR205C 2880 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 UTP5YDR398W 1932 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 RIX7YLL034C 2514 nt5.77□□□□□ -1.49
TY1A-LR2P0CX72 NGR1YBR212W 2019 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 ATP2YJR121W 1536 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 tA(AGC)DtA(AGC)D 73 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 tA(AGC)FtA(AGC)F 73 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 tA(AGC)GtA(AGC)G 73 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 tA(AGC)HtA(AGC)H 73 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 tA(AGC)JtA(AGC)J 73 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 tA(AGC)K1tA(AGC)K1 73 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 tA(AGC)K2tA(AGC)K2 73 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 tA(AGC)LtA(AGC)L 73 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 OCA6YDR067C 675 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 tA(AGC)M1tA(AGC)M1 73 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 tA(AGC)M2tA(AGC)M2 73 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 tA(AGC)PtA(AGC)P 73 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 MTC7YEL033W 420 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 HIS1YER055C 894 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 CYC3YAL039C 810 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 CMS1YLR003C 876 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 PFK27YOL136C 1194 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 YOR238WYOR238W 912 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 IPL1YPL209C 1104 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 EKI1YDR147W 1605 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 HXT15YDL245C 1704 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 HXT16YJR158W 1704 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 PCL8YPL219W 1479 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 KEL1YHR158C 3495 nt5.76□□□□□ -1.49
TY1A-LR2P0CX72 RPT2YDL007W 1314 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 RSM28YDR494W 1086 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 URA3YEL021W 804 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 PAU17YLL025W 375 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 DLT1YMR126C 1029 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 MIC27YNL100W 705 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 RER2YBR002C 861 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 DCI1YOR180C 816 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 YOR338WYOR338W 1092 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 YBR071WYBR071W 636 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 YPR130CYPR130C 408 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 ECM31YBR176W 939 nt5.75□□□□□ -1.49
TY1A-LR2P0CX72 ASA1YPR085C 1332 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 NOP58YOR310C 1536 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 YCK1YHR135C 1617 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 YHR202WYHR202W 1809 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 GIM4YEL003W 336 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 YFL013W-AYFL013W-A 804 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 SER2YGR208W 930 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 IME1YJR094C 1083 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 TFS1YLR178C 660 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 CUE4YML101C 354 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 PFA3YNL326C 1011 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 YOL013W-BYOL013W-B 291 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 CYC2YOR037W 1101 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 CST26YBR042C 1194 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 GRE1YPL223C 507 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 YPT10YBR264C 600 nt5.74□□□□□ -1.49
TY1A-LR2P0CX72 APE4YHR113W 1473 nt5.74□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms