Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM2Q9C040 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM2Q9C040 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRIM2Q9C040 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM2Q9C040 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM2Q9C040 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM2Q9C040 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
TRIM2Q9C040 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM2Q9C040 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM2Q9C040 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM2Q9C040 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRIM2Q9C040 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRIM2Q9C040 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM2Q9C040 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM2Q9C040 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM2Q9C040 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM2Q9C040 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM2Q9C040 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM2Q9C040 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM2Q9C040 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM2Q9C040 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM2Q9C040 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM2Q9C040 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM2Q9C040 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRIM2Q9C040 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TRIM2Q9C040 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM2Q9C040 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM2Q9C040 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM2Q9C040 ALDH1A3-203ENST00000557963 1670 ntBASIC20.86■□□□□ 0.93
TRIM2Q9C040 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM2Q9C040 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM2Q9C040 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM2Q9C040 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM2Q9C040 AF131216.4-201ENST00000638924 1588 ntBASIC20.85■□□□□ 0.93
TRIM2Q9C040 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM2Q9C040 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TRIM2Q9C040 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM2Q9C040 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM2Q9C040 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM2Q9C040 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRIM2Q9C040 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRIM2Q9C040 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRIM2Q9C040 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM2Q9C040 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRIM2Q9C040 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM2Q9C040 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM2Q9C040 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM2Q9C040 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM2Q9C040 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM2Q9C040 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM2Q9C040 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM2Q9C040 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM2Q9C040 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRIM2Q9C040 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM2Q9C040 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM2Q9C040 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRIM2Q9C040 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM2Q9C040 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TRIM2Q9C040 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TRIM2Q9C040 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM2Q9C040 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM2Q9C040 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM2Q9C040 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM2Q9C040 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM2Q9C040 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM2Q9C040 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM2Q9C040 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TRIM2Q9C040 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.83■□□□□ 0.92
TRIM2Q9C040 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM2Q9C040 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM2Q9C040 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TRIM2Q9C040 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM2Q9C040 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM2Q9C040 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM2Q9C040 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRIM2Q9C040 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM2Q9C040 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM2Q9C040 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM2Q9C040 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM2Q9C040 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM2Q9C040 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM2Q9C040 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM2Q9C040 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM2Q9C040 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM2Q9C040 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.81■□□□□ 0.92
TRIM2Q9C040 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM2Q9C040 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM2Q9C040 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM2Q9C040 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM2Q9C040 ANOS2P-203ENST00000472227 1816 ntBASIC20.81■□□□□ 0.92
TRIM2Q9C040 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM2Q9C040 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM2Q9C040 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM2Q9C040 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM2Q9C040 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM2Q9C040 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM2Q9C040 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRIM2Q9C040 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM2Q9C040 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM2Q9C040 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms