Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPSF7Q8N684 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPSF7Q8N684 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.22■■□□□ 1.15
CPSF7Q8N684 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.22■■□□□ 1.15
CPSF7Q8N684 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPSF7Q8N684 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPSF7Q8N684 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPSF7Q8N684 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPSF7Q8N684 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPSF7Q8N684 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CPSF7Q8N684 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CPSF7Q8N684 KRT18P10-201ENST00000388836 1287 ntBASIC22.21■■□□□ 1.15
CPSF7Q8N684 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CPSF7Q8N684 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPSF7Q8N684 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.21■■□□□ 1.15
CPSF7Q8N684 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.2■■□□□ 1.14
CPSF7Q8N684 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.2■■□□□ 1.14
CPSF7Q8N684 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.2■■□□□ 1.14
CPSF7Q8N684 KRT8P33-201ENST00000508125 1423 ntBASIC22.2■■□□□ 1.14
CPSF7Q8N684 EP400NL-214ENST00000641289 2402 ntBASIC22.2■■□□□ 1.14
CPSF7Q8N684 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPSF7Q8N684 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.2■■□□□ 1.14
CPSF7Q8N684 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPSF7Q8N684 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.2■■□□□ 1.14
CPSF7Q8N684 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.19■■□□□ 1.14
CPSF7Q8N684 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPSF7Q8N684 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CPSF7Q8N684 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.19■■□□□ 1.14
CPSF7Q8N684 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPSF7Q8N684 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPSF7Q8N684 AC074183.2-201ENST00000623112 922 ntBASIC22.19■■□□□ 1.14
CPSF7Q8N684 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.19■■□□□ 1.14
CPSF7Q8N684 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.19■■□□□ 1.14
CPSF7Q8N684 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPSF7Q8N684 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.19■■□□□ 1.14
CPSF7Q8N684 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CPSF7Q8N684 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPSF7Q8N684 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPSF7Q8N684 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPSF7Q8N684 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CPSF7Q8N684 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPSF7Q8N684 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPSF7Q8N684 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.18■■□□□ 1.14
CPSF7Q8N684 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.18■■□□□ 1.14
CPSF7Q8N684 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.18■■□□□ 1.14
CPSF7Q8N684 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CPSF7Q8N684 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
CPSF7Q8N684 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CPSF7Q8N684 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.17■■□□□ 1.14
CPSF7Q8N684 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CPSF7Q8N684 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.17■■□□□ 1.14
CPSF7Q8N684 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.17■■□□□ 1.14
CPSF7Q8N684 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CPSF7Q8N684 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CPSF7Q8N684 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CPSF7Q8N684 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CPSF7Q8N684 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPSF7Q8N684 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPSF7Q8N684 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPSF7Q8N684 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPSF7Q8N684 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPSF7Q8N684 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPSF7Q8N684 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CPSF7Q8N684 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPSF7Q8N684 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.16■■□□□ 1.14
CPSF7Q8N684 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CPSF7Q8N684 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CPSF7Q8N684 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CPSF7Q8N684 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CPSF7Q8N684 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CPSF7Q8N684 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CPSF7Q8N684 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CPSF7Q8N684 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CPSF7Q8N684 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.15■■□□□ 1.14
CPSF7Q8N684 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.15■■□□□ 1.14
CPSF7Q8N684 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.15■■□□□ 1.14
CPSF7Q8N684 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CPSF7Q8N684 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CPSF7Q8N684 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.14■■□□□ 1.14
CPSF7Q8N684 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CPSF7Q8N684 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
CPSF7Q8N684 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CPSF7Q8N684 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.14■■□□□ 1.13
CPSF7Q8N684 PVT1_1.1-201ENST00000615125 194 ntBASIC22.14■■□□□ 1.13
CPSF7Q8N684 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CPSF7Q8N684 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
CPSF7Q8N684 C1orf229-201ENST00000623686 2258 ntBASIC22.14■■□□□ 1.13
CPSF7Q8N684 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CPSF7Q8N684 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.14■■□□□ 1.13
CPSF7Q8N684 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.14■■□□□ 1.13
CPSF7Q8N684 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.14■■□□□ 1.13
CPSF7Q8N684 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CPSF7Q8N684 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CPSF7Q8N684 LINC00565-201ENST00000562710 2331 ntBASIC22.13■■□□□ 1.13
CPSF7Q8N684 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CPSF7Q8N684 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CPSF7Q8N684 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CPSF7Q8N684 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CPSF7Q8N684 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CPSF7Q8N684 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms