Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH1Q08174 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH1Q08174 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH1Q08174 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDH1Q08174 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PCDH1Q08174 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH1Q08174 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH1Q08174 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH1Q08174 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDH1Q08174 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDH1Q08174 SNX5-217ENST00000606557 1087 ntBASIC21.96■■□□□ 1.11
PCDH1Q08174 AC021242.3-201ENST00000607598 1377 ntBASIC21.96■■□□□ 1.11
PCDH1Q08174 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH1Q08174 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH1Q08174 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PCDH1Q08174 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDH1Q08174 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH1Q08174 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH1Q08174 DUSP8P5-201ENST00000422884 1815 ntBASIC21.95■■□□□ 1.1
PCDH1Q08174 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH1Q08174 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDH1Q08174 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDH1Q08174 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH1Q08174 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH1Q08174 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH1Q08174 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH1Q08174 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PCDH1Q08174 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDH1Q08174 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
PCDH1Q08174 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDH1Q08174 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH1Q08174 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH1Q08174 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH1Q08174 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH1Q08174 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH1Q08174 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDH1Q08174 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH1Q08174 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH1Q08174 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDH1Q08174 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH1Q08174 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDH1Q08174 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH1Q08174 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH1Q08174 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH1Q08174 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDH1Q08174 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH1Q08174 AC092068.2-201ENST00000590491 1708 ntBASIC21.93■■□□□ 1.1
PCDH1Q08174 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDH1Q08174 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH1Q08174 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDH1Q08174 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH1Q08174 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH1Q08174 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH1Q08174 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCDH1Q08174 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH1Q08174 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH1Q08174 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PCDH1Q08174 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH1Q08174 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PCDH1Q08174 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
PCDH1Q08174 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.91■■□□□ 1.1
PCDH1Q08174 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.91■■□□□ 1.1
PCDH1Q08174 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH1Q08174 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDH1Q08174 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
PCDH1Q08174 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH1Q08174 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH1Q08174 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH1Q08174 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH1Q08174 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH1Q08174 ANOS2P-203ENST00000472227 1816 ntBASIC21.9■■□□□ 1.1
PCDH1Q08174 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH1Q08174 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDH1Q08174 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH1Q08174 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDH1Q08174 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDH1Q08174 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.89■■□□□ 1.1
PCDH1Q08174 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDH1Q08174 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
PCDH1Q08174 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH1Q08174 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDH1Q08174 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDH1Q08174 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH1Q08174 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.89■■□□□ 1.09
PCDH1Q08174 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDH1Q08174 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH1Q08174 MIR6722-201ENST00000617286 78 ntBASIC21.89■■□□□ 1.09
PCDH1Q08174 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PCDH1Q08174 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PCDH1Q08174 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH1Q08174 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDH1Q08174 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDH1Q08174 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PCDH1Q08174 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDH1Q08174 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDH1Q08174 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH1Q08174 Z92544.1-202ENST00000571933 1220 ntBASIC21.88■■□□□ 1.09
PCDH1Q08174 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.88■■□□□ 1.09
PCDH1Q08174 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDH1Q08174 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms