Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SLC6A12P48065 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
SLC6A12P48065 DUSP8P5-201ENST00000422884 1815 ntBASIC22.08■■□□□ 1.12
SLC6A12P48065 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.08■■□□□ 1.12
SLC6A12P48065 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SLC6A12P48065 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SLC6A12P48065 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC6A12P48065 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC6A12P48065 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.07■■□□□ 1.12
SLC6A12P48065 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC6A12P48065 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC6A12P48065 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC6A12P48065 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC6A12P48065 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.06■■□□□ 1.12
SLC6A12P48065 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC6A12P48065 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A12P48065 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.06■■□□□ 1.12
SLC6A12P48065 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC6A12P48065 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A12P48065 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC6A12P48065 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SLC6A12P48065 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.05■■□□□ 1.12
SLC6A12P48065 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
SLC6A12P48065 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A12P48065 ANOS2P-203ENST00000472227 1816 ntBASIC22.05■■□□□ 1.12
SLC6A12P48065 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A12P48065 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A12P48065 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A12P48065 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A12P48065 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A12P48065 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A12P48065 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A12P48065 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.04■■□□□ 1.12
SLC6A12P48065 BX664725.1-201ENST00000438252 379 ntBASIC22.04■■□□□ 1.12
SLC6A12P48065 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SLC6A12P48065 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.04■■□□□ 1.12
SLC6A12P48065 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SLC6A12P48065 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.04■■□□□ 1.12
SLC6A12P48065 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A12P48065 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SLC6A12P48065 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A12P48065 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SLC6A12P48065 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A12P48065 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SLC6A12P48065 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.03■■□□□ 1.12
SLC6A12P48065 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A12P48065 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SLC6A12P48065 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.03■■□□□ 1.12
SLC6A12P48065 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A12P48065 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A12P48065 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SLC6A12P48065 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SLC6A12P48065 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A12P48065 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A12P48065 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A12P48065 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A12P48065 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.03■■□□□ 1.12
SLC6A12P48065 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A12P48065 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SLC6A12P48065 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A12P48065 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.03■■□□□ 1.12
SLC6A12P48065 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.02■■□□□ 1.12
SLC6A12P48065 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A12P48065 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A12P48065 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.02■■□□□ 1.12
SLC6A12P48065 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A12P48065 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A12P48065 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SLC6A12P48065 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.02■■□□□ 1.12
SLC6A12P48065 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SLC6A12P48065 AC092068.2-201ENST00000590491 1708 ntBASIC22.02■■□□□ 1.12
SLC6A12P48065 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SLC6A12P48065 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A12P48065 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SLC6A12P48065 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.01■■□□□ 1.11
SLC6A12P48065 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A12P48065 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A12P48065 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A12P48065 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A12P48065 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.01■■□□□ 1.11
SLC6A12P48065 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A12P48065 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22■■□□□ 1.11
SLC6A12P48065 H19-210ENST00000439725 1929 ntTSL 2 BASIC22■■□□□ 1.11
SLC6A12P48065 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A12P48065 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22■■□□□ 1.11
SLC6A12P48065 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
SLC6A12P48065 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A12P48065 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC6A12P48065 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC6A12P48065 Z92544.1-202ENST00000571933 1220 ntBASIC22■■□□□ 1.11
SLC6A12P48065 AL451085.2-201ENST00000605085 799 ntBASIC22■■□□□ 1.11
SLC6A12P48065 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22■■□□□ 1.11
SLC6A12P48065 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A12P48065 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A12P48065 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SLC6A12P48065 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A12P48065 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A12P48065 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A12P48065 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A12P48065 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms