Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YOR008W-BYOR008W-B 102 nt6.37□□□□□ -1.39
MSH3P25336 UBC11YOR339C 471 nt6.37□□□□□ -1.39
MSH3P25336 CSH1YBR161W 1131 nt6.37□□□□□ -1.39
MSH3P25336 DBF4YDR052C 2115 nt6.37□□□□□ -1.39
MSH3P25336 CEG1YGL130W 1380 nt6.36□□□□□ -1.39
MSH3P25336 YLR157W-EYLR157W-E 165 nt6.36□□□□□ -1.39
MSH3P25336 YBL077WYBL077W 432 nt6.36□□□□□ -1.39
MSH3P25336 YOR292CYOR292C 930 nt6.36□□□□□ -1.39
MSH3P25336 YPL073CYPL073C 486 nt6.36□□□□□ -1.39
MSH3P25336 YPR015CYPR015C 744 nt6.36□□□□□ -1.39
MSH3P25336 YPR153WYPR153W 423 nt6.36□□□□□ -1.39
MSH3P25336 GRX1YCL035C 333 nt6.36□□□□□ -1.39
MSH3P25336 PRI2YKL045W 1587 nt6.35□□□□□ -1.39
MSH3P25336 SKS1YPL026C 1509 nt6.35□□□□□ -1.39
MSH3P25336 YLR108CYLR108C 1458 nt6.35□□□□□ -1.39
MSH3P25336 YNL095CYNL095C 1929 nt6.35□□□□□ -1.39
MSH3P25336 ADE12YNL220W 1302 nt6.35□□□□□ -1.39
MSH3P25336 GUP2YPL189W 1830 nt6.35□□□□□ -1.39
MSH3P25336 PEX14YGL153W 1026 nt6.35□□□□□ -1.39
MSH3P25336 BUD32YGR262C 786 nt6.35□□□□□ -1.39
MSH3P25336 RPC25YKL144C 639 nt6.35□□□□□ -1.39
MSH3P25336 NTR2YKR022C 969 nt6.35□□□□□ -1.39
MSH3P25336 YNR025CYNR025C 360 nt6.35□□□□□ -1.39
MSH3P25336 SEC18YBR080C 2277 nt6.35□□□□□ -1.39
MSH3P25336 AIM10YER087W 1731 nt6.35□□□□□ -1.39
MSH3P25336 IML2YJL082W 2196 nt6.35□□□□□ -1.39
MSH3P25336 HMRA1YCR097W 381 nt6.34□□□□□ -1.39
MSH3P25336 ATO3YDR384C 828 nt6.34□□□□□ -1.39
MSH3P25336 SEC20YDR498C 1152 nt6.34□□□□□ -1.39
MSH3P25336 CHO1YER026C 831 nt6.34□□□□□ -1.39
MSH3P25336 BMH1YER177W 804 nt6.34□□□□□ -1.39
MSH3P25336 DSD1YGL196W 1287 nt6.34□□□□□ -1.39
MSH3P25336 RPC17YJL011C 486 nt6.34□□□□□ -1.39
MSH3P25336 SMD3YLR147C 306 nt6.34□□□□□ -1.39
MSH3P25336 EMG1YLR186W 759 nt6.34□□□□□ -1.39
MSH3P25336 RAD10YML095C 633 nt6.34□□□□□ -1.39
MSH3P25336 GRX5YPL059W 453 nt6.34□□□□□ -1.39
MSH3P25336 ERI1YPL096C-A 207 nt6.34□□□□□ -1.39
MSH3P25336 SRP101YDR292C 1866 nt6.34□□□□□ -1.39
MSH3P25336 UBX2YML013W 1755 nt6.34□□□□□ -1.4
MSH3P25336 PHO12YHR215W 1404 nt6.33□□□□□ -1.4
MSH3P25336 PHO11YAR071W 1404 nt6.33□□□□□ -1.4
MSH3P25336 LCB2YDR062W 1686 nt6.33□□□□□ -1.4
MSH3P25336 STE2YFL026W 1296 nt6.33□□□□□ -1.4
MSH3P25336 DDI2YFL061W 678 nt6.33□□□□□ -1.4
MSH3P25336 DCV1YFR012W 609 nt6.33□□□□□ -1.4
MSH3P25336 SOH1YGL127C 384 nt6.33□□□□□ -1.4
MSH3P25336 YHB1YGR234W 1200 nt6.33□□□□□ -1.4
MSH3P25336 CUP1-1YHR053C 186 nt6.33□□□□□ -1.4
MSH3P25336 CUP1-2YHR055C 186 nt6.33□□□□□ -1.4
MSH3P25336 DDI3YNL335W 678 nt6.33□□□□□ -1.4
MSH3P25336 GLO4YOR040W 858 nt6.33□□□□□ -1.4
MSH3P25336 SPS4YOR313C 1017 nt6.33□□□□□ -1.4
MSH3P25336 SPO19YPL130W 672 nt6.33□□□□□ -1.4
MSH3P25336 POC4YPL144W 447 nt6.33□□□□□ -1.4
MSH3P25336 MRPS5YBR251W 924 nt6.33□□□□□ -1.4
MSH3P25336 DEG1YFL001W 1329 nt6.32□□□□□ -1.4
MSH3P25336 YFR052C-AYFR052C-A 306 nt6.32□□□□□ -1.4
MSH3P25336 YHR214WYHR214W 612 nt6.32□□□□□ -1.4
MSH3P25336 GTT1YIR038C 705 nt6.32□□□□□ -1.4
MSH3P25336 SFH5YJL145W 885 nt6.32□□□□□ -1.4
MSH3P25336 ZRT2YLR130C 1269 nt6.32□□□□□ -1.4
MSH3P25336 YAR066WYAR066W 612 nt6.32□□□□□ -1.4
MSH3P25336 HEK2YBL032W 1146 nt6.32□□□□□ -1.4
MSH3P25336 RUF20RUF20 443 nt6.32□□□□□ -1.4
MSH3P25336 MLC2YPR188C 492 nt6.32□□□□□ -1.4
MSH3P25336 TRP3YKL211C 1455 nt6.32□□□□□ -1.4
MSH3P25336 GSH2YOL049W 1476 nt6.32□□□□□ -1.4
MSH3P25336 STE12YHR084W 2067 nt6.32□□□□□ -1.4
MSH3P25336 MNN2YBR015C 1794 nt6.31□□□□□ -1.4
MSH3P25336 SRO9YCL037C 1305 nt6.31□□□□□ -1.4
MSH3P25336 TBF1YPL128C 1689 nt6.31□□□□□ -1.4
MSH3P25336 IDP1YDL066W 1287 nt6.31□□□□□ -1.4
MSH3P25336 YDR042CYDR042C 603 nt6.31□□□□□ -1.4
MSH3P25336 TIM21YGR033C 720 nt6.31□□□□□ -1.4
MSH3P25336 SPC3YLR066W 555 nt6.31□□□□□ -1.4
MSH3P25336 SIC1YLR079W 855 nt6.31□□□□□ -1.4
MSH3P25336 YLR156WYLR156W 345 nt6.31□□□□□ -1.4
MSH3P25336 YLR157W-DYLR157W-D 213 nt6.31□□□□□ -1.4
MSH3P25336 YLR159WYLR159W 345 nt6.31□□□□□ -1.4
MSH3P25336 YLR161WYLR161W 345 nt6.31□□□□□ -1.4
MSH3P25336 YMR181CYMR181C 465 nt6.31□□□□□ -1.4
MSH3P25336 YOL118CYOL118C 309 nt6.31□□□□□ -1.4
MSH3P25336 BBP1YPL255W 1158 nt6.31□□□□□ -1.4
MSH3P25336 YBR144CYBR144C 315 nt6.31□□□□□ -1.4
MSH3P25336 YCL041CYCL041C 495 nt6.31□□□□□ -1.4
MSH3P25336 PUS9YDL036C 1389 nt6.31□□□□□ -1.4
MSH3P25336 ISN1YOR155C 1353 nt6.31□□□□□ -1.4
MSH3P25336 YLH47YPR125W 1365 nt6.31□□□□□ -1.4
MSH3P25336 NUP42YDR192C 1293 nt6.3□□□□□ -1.4
MSH3P25336 MOG1YJR074W 657 nt6.3□□□□□ -1.4
MSH3P25336 NSE1YLR007W 1011 nt6.3□□□□□ -1.4
MSH3P25336 VMA6YLR447C 1038 nt6.3□□□□□ -1.4
MSH3P25336 MDM12YOL009C 816 nt6.3□□□□□ -1.4
MSH3P25336 MPD1YOR288C 957 nt6.3□□□□□ -1.4
MSH3P25336 RPS9AYPL081W 594 nt6.3□□□□□ -1.4
MSH3P25336 ENV7YPL236C 1095 nt6.3□□□□□ -1.4
MSH3P25336 NRG2YBR066C 663 nt6.3□□□□□ -1.4
MSH3P25336 FAA4YMR246W 2085 nt6.3□□□□□ -1.4
MSH3P25336 SIT1YEL065W 1887 nt6.3□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 43.1 ms