Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.19■□□□□ 0.98
SDF2Q99470 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.19■□□□□ 0.98
SDF2Q99470 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.19■□□□□ 0.98
SDF2Q99470 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.18■□□□□ 0.98
SDF2Q99470 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF2Q99470 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDF2Q99470 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDF2Q99470 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF2Q99470 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SDF2Q99470 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
SDF2Q99470 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SDF2Q99470 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDF2Q99470 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDF2Q99470 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF2Q99470 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.17■□□□□ 0.98
SDF2Q99470 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.17■□□□□ 0.98
SDF2Q99470 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF2Q99470 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SDF2Q99470 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF2Q99470 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SDF2Q99470 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF2Q99470 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF2Q99470 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.17■□□□□ 0.98
SDF2Q99470 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SDF2Q99470 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.16■□□□□ 0.98
SDF2Q99470 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.16■□□□□ 0.98
SDF2Q99470 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDF2Q99470 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.16■□□□□ 0.98
SDF2Q99470 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SDF2Q99470 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDF2Q99470 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDF2Q99470 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDF2Q99470 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.15■□□□□ 0.98
SDF2Q99470 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.15■□□□□ 0.98
SDF2Q99470 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SDF2Q99470 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SDF2Q99470 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SDF2Q99470 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.15■□□□□ 0.98
SDF2Q99470 AL031848.2-201ENST00000607670 837 ntBASIC21.15■□□□□ 0.98
SDF2Q99470 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDF2Q99470 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDF2Q99470 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDF2Q99470 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.15■□□□□ 0.98
SDF2Q99470 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SDF2Q99470 ALDH1A3-203ENST00000557963 1670 ntBASIC21.15■□□□□ 0.98
SDF2Q99470 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.15■□□□□ 0.98
SDF2Q99470 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDF2Q99470 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDF2Q99470 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SDF2Q99470 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDF2Q99470 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SDF2Q99470 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SDF2Q99470 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SDF2Q99470 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SDF2Q99470 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDF2Q99470 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SDF2Q99470 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDF2Q99470 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDF2Q99470 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.13■□□□□ 0.97
SDF2Q99470 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.13■□□□□ 0.97
SDF2Q99470 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.13■□□□□ 0.97
SDF2Q99470 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDF2Q99470 AC004448.1-201ENST00000458332 883 ntBASIC21.13■□□□□ 0.97
SDF2Q99470 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.13■□□□□ 0.97
SDF2Q99470 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDF2Q99470 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SDF2Q99470 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF2Q99470 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SDF2Q99470 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.12■□□□□ 0.97
SDF2Q99470 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SDF2Q99470 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.12■□□□□ 0.97
SDF2Q99470 AC137630.3-201ENST00000607245 391 ntBASIC21.12■□□□□ 0.97
SDF2Q99470 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SDF2Q99470 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF2Q99470 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF2Q99470 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.12■□□□□ 0.97
SDF2Q99470 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.12■□□□□ 0.97
SDF2Q99470 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF2Q99470 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF2Q99470 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF2Q99470 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SDF2Q99470 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SDF2Q99470 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.11■□□□□ 0.97
SDF2Q99470 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.11■□□□□ 0.97
SDF2Q99470 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDF2Q99470 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.11■□□□□ 0.97
SDF2Q99470 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDF2Q99470 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SDF2Q99470 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF2Q99470 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF2Q99470 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF2Q99470 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF2Q99470 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SDF2Q99470 DUSP8P5-201ENST00000422884 1815 ntBASIC21.1■□□□□ 0.97
SDF2Q99470 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SDF2Q99470 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF2Q99470 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF2Q99470 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.09■□□□□ 0.97
SDF2Q99470 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF2Q99470 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms