Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 YHR177WYHR177W 1362 nt5.91□□□□□ -1.46
NPL3Q01560 NUF2YOL069W 1356 nt5.91□□□□□ -1.46
NPL3Q01560 THI22YPR121W 1719 nt5.91□□□□□ -1.46
NPL3Q01560 GUD1YDL238C 1470 nt5.9□□□□□ -1.46
NPL3Q01560 MRPL1YDR116C 858 nt5.9□□□□□ -1.46
NPL3Q01560 YDR278CYDR278C 318 nt5.9□□□□□ -1.46
NPL3Q01560 GIC2YDR309C 1152 nt5.9□□□□□ -1.46
NPL3Q01560 COS4YFL062W 1140 nt5.9□□□□□ -1.46
NPL3Q01560 YGR219WYGR219W 342 nt5.9□□□□□ -1.46
NPL3Q01560 YLR365WYLR365W 333 nt5.9□□□□□ -1.46
NPL3Q01560 YMR1YJR110W 2067 nt5.9□□□□□ -1.47
NPL3Q01560 SET5YHR207C 1581 nt5.89□□□□□ -1.47
NPL3Q01560 ESC8YOL017W 2145 nt5.89□□□□□ -1.47
NPL3Q01560 RPT3YDR394W 1287 nt5.89□□□□□ -1.47
NPL3Q01560 RSM26YJR101W 801 nt5.89□□□□□ -1.47
NPL3Q01560 ICT1YLR099C 1185 nt5.89□□□□□ -1.47 RIP-Chip
NPL3Q01560 ORM2YLR350W 651 nt5.89□□□□□ -1.47 RIP-Chip
NPL3Q01560 COS3YML132W 1140 nt5.89□□□□□ -1.47
NPL3Q01560 YBL029C-AYBL029C-A 285 nt5.89□□□□□ -1.47 RIP-Chip
NPL3Q01560 MRPS12YNR036C 462 nt5.89□□□□□ -1.47 RIP-Chip
NPL3Q01560 COS2YBR302C 1140 nt5.89□□□□□ -1.47
NPL3Q01560 PUS9YDL036C 1389 nt5.89□□□□□ -1.47
NPL3Q01560 MRC1YCL061C 3291 nt5.89□□□□□ -1.47
NPL3Q01560 MPP10YJR002W 1782 nt5.88□□□□□ -1.47
NPL3Q01560 GIP1YBR045C 1920 nt5.88□□□□□ -1.47
NPL3Q01560 LUC7YDL087C 786 nt5.88□□□□□ -1.47
NPL3Q01560 RPL12AYEL054C 498 nt5.88□□□□□ -1.47 RIP-Chip
NPL3Q01560 DDI2YFL061W 678 nt5.88□□□□□ -1.47
NPL3Q01560 SSK1YLR006C 2139 nt5.88□□□□□ -1.47
NPL3Q01560 ECM19YLR390W 339 nt5.88□□□□□ -1.47 RIP-Chip
NPL3Q01560 YNL174WYNL174W 573 nt5.88□□□□□ -1.47
NPL3Q01560 SPS18YNL204C 903 nt5.88□□□□□ -1.47
NPL3Q01560 ELA1YNL230C 1140 nt5.88□□□□□ -1.47 RIP-Chip
NPL3Q01560 DDI3YNL335W 678 nt5.88□□□□□ -1.47
NPL3Q01560 CKB2YOR039W 777 nt5.88□□□□□ -1.47 RIP-Chip
NPL3Q01560 MCT1YOR221C 1083 nt5.88□□□□□ -1.47 RIP-Chip
NPL3Q01560 MRPL37YBR268W 318 nt5.88□□□□□ -1.47 RIP-Chip
NPL3Q01560 ADE12YNL220W 1302 nt5.88□□□□□ -1.47
NPL3Q01560 MET3YJR010W 1536 nt5.88□□□□□ -1.47
NPL3Q01560 TCM62YBR044C 1719 nt5.88□□□□□ -1.47
NPL3Q01560 SAS10YDL153C 1833 nt5.88□□□□□ -1.47
NPL3Q01560 PYC2YBR218C 3543 nt5.87□□□□□ -1.47
NPL3Q01560 YDL119CYDL119C 924 nt5.87□□□□□ -1.47
NPL3Q01560 RPB7YDR404C 516 nt5.87□□□□□ -1.47
NPL3Q01560 LEU5YHR002W 1074 nt5.87□□□□□ -1.47 RIP-Chip
NPL3Q01560 YIL028WYIL028W 399 nt5.87□□□□□ -1.47
NPL3Q01560 ECM1YAL059W 639 nt5.87□□□□□ -1.47 RIP-Chip
NPL3Q01560 NSE1YLR007W 1011 nt5.87□□□□□ -1.47
NPL3Q01560 SLM5YCR024C 1479 nt5.87□□□□□ -1.47
NPL3Q01560 RAD24YER173W 1980 nt5.87□□□□□ -1.47
NPL3Q01560 STE13YOR219C 2796 nt5.87□□□□□ -1.47
NPL3Q01560 MTC5YDR128W 3447 nt5.87□□□□□ -1.47
NPL3Q01560 KKQ8YKL168C 2175 nt5.86□□□□□ -1.47
NPL3Q01560 EKI1YDR147W 1605 nt5.86□□□□□ -1.47
NPL3Q01560 PRI2YKL045W 1587 nt5.86□□□□□ -1.47 RIP-Chip
NPL3Q01560 TEP1YNL128W 1305 nt5.86□□□□□ -1.47
NPL3Q01560 COS7YDL248W 1152 nt5.86□□□□□ -1.47
NPL3Q01560 HIM1YDR317W 1245 nt5.86□□□□□ -1.47
NPL3Q01560 SNL1YIL016W 480 nt5.86□□□□□ -1.47 RIP-Chip
NPL3Q01560 YJL047C-AYJL047C-A 135 nt5.86□□□□□ -1.47
NPL3Q01560 COS5YJR161C 1152 nt5.86□□□□□ -1.47 RIP-Chip
NPL3Q01560 VPS71YML041C 843 nt5.86□□□□□ -1.47
NPL3Q01560 GLO4YOR040W 858 nt5.86□□□□□ -1.47 RIP-Chip
NPL3Q01560 GLN1YPR035W 1113 nt5.86□□□□□ -1.47 RIP-Chip
NPL3Q01560 MRPS5YBR251W 924 nt5.86□□□□□ -1.47
NPL3Q01560 PAT1YCR077C 2391 nt5.86□□□□□ -1.47
NPL3Q01560 ALG9YNL219C 1668 nt5.85□□□□□ -1.47
NPL3Q01560 HST1YOL068C 1512 nt5.85□□□□□ -1.47
NPL3Q01560 ATG4YNL223W 1485 nt5.85□□□□□ -1.47
NPL3Q01560 ZRC1YMR243C 1329 nt5.85□□□□□ -1.47
NPL3Q01560 RNH202YDR279W 1053 nt5.85□□□□□ -1.47
NPL3Q01560 PAD1YDR538W 729 nt5.85□□□□□ -1.47 RIP-Chip
NPL3Q01560 YHB1YGR234W 1200 nt5.85□□□□□ -1.47
NPL3Q01560 tR(ACG)DtR(ACG)D 73 nt5.85□□□□□ -1.47
NPL3Q01560 tR(ACG)EtR(ACG)E 73 nt5.85□□□□□ -1.47
NPL3Q01560 tR(ACG)KtR(ACG)K 73 nt5.85□□□□□ -1.47
NPL3Q01560 tR(ACG)LtR(ACG)L 73 nt5.85□□□□□ -1.47
NPL3Q01560 tR(ACG)OtR(ACG)O 73 nt5.85□□□□□ -1.47
NPL3Q01560 YIR021W-AYIR021W-A 213 nt5.85□□□□□ -1.47
NPL3Q01560 YML012C-AYML012C-A 378 nt5.85□□□□□ -1.47
NPL3Q01560 RUF20RUF20 443 nt5.85□□□□□ -1.47
NPL3Q01560 THI80YOR143C 960 nt5.85□□□□□ -1.47
NPL3Q01560 YOR342CYOR342C 960 nt5.85□□□□□ -1.47 RIP-Chip
NPL3Q01560 CLB2YPR119W 1476 nt5.84□□□□□ -1.47
NPL3Q01560 NOP2YNL061W 1857 nt5.84□□□□□ -1.47
NPL3Q01560 HMS1YOR032C 1305 nt5.84□□□□□ -1.47
NPL3Q01560 RPC53YDL150W 1269 nt5.84□□□□□ -1.47
NPL3Q01560 NTR2YKR022C 969 nt5.84□□□□□ -1.47
NPL3Q01560 YLR126CYLR126C 756 nt5.84□□□□□ -1.47
NPL3Q01560 SHP1YBL058W 1272 nt5.84□□□□□ -1.47
NPL3Q01560 YNL217WYNL217W 981 nt5.84□□□□□ -1.47
NPL3Q01560 YOR062CYOR062C 807 nt5.84□□□□□ -1.47 RIP-Chip
NPL3Q01560 IDI1YPL117C 867 nt5.84□□□□□ -1.47
NPL3Q01560 ECM8YBR076W 1065 nt5.84□□□□□ -1.47
NPL3Q01560 YPR123CYPR123C 435 nt5.84□□□□□ -1.47
NPL3Q01560 ALT1YLR089C 1779 nt5.84□□□□□ -1.47
NPL3Q01560 MNS1YJR131W 1650 nt5.83□□□□□ -1.48
NPL3Q01560 RME1YGR044C 903 nt5.83□□□□□ -1.48 RIP-Chip
NPL3Q01560 CPR8YNR028W 927 nt5.83□□□□□ -1.48 RIP-Chip
NPL3Q01560 YOL163WYOL163W 510 nt5.83□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 29.2 ms