Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
KRT28Q7Z3Y7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.62■■■□□ 2.65
KRT28Q7Z3Y7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
KRT28Q7Z3Y7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
KRT28Q7Z3Y7 AC136469.2-201ENST00000623944 1028 ntBASIC31.61■■■□□ 2.65
KRT28Q7Z3Y7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC31.61■■■□□ 2.65
KRT28Q7Z3Y7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
KRT28Q7Z3Y7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
KRT28Q7Z3Y7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.6■■■□□ 2.65
KRT28Q7Z3Y7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.6■■■□□ 2.65
KRT28Q7Z3Y7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
KRT28Q7Z3Y7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC31.59■■■□□ 2.65
KRT28Q7Z3Y7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
KRT28Q7Z3Y7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.59■■■□□ 2.65
KRT28Q7Z3Y7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
KRT28Q7Z3Y7 AC022517.1-201ENST00000592429 346 ntBASIC31.59■■■□□ 2.65
KRT28Q7Z3Y7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC31.59■■■□□ 2.65
KRT28Q7Z3Y7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
KRT28Q7Z3Y7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
KRT28Q7Z3Y7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
KRT28Q7Z3Y7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
KRT28Q7Z3Y7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
KRT28Q7Z3Y7 AC233992.3-201ENST00000607491 485 ntBASIC31.58■■■□□ 2.65
KRT28Q7Z3Y7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC31.58■■■□□ 2.65
KRT28Q7Z3Y7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
KRT28Q7Z3Y7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.58■■■□□ 2.65
KRT28Q7Z3Y7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
KRT28Q7Z3Y7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC31.57■■■□□ 2.64
KRT28Q7Z3Y7 AC034268.1-201ENST00000441047 882 ntBASIC31.57■■■□□ 2.64
KRT28Q7Z3Y7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.57■■■□□ 2.64
KRT28Q7Z3Y7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC31.57■■■□□ 2.64
KRT28Q7Z3Y7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
KRT28Q7Z3Y7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
KRT28Q7Z3Y7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
KRT28Q7Z3Y7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
KRT28Q7Z3Y7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
KRT28Q7Z3Y7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
KRT28Q7Z3Y7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC31.56■■■□□ 2.64
KRT28Q7Z3Y7 MPST-208ENST00000628507 698 ntTSL 5 BASIC31.56■■■□□ 2.64
KRT28Q7Z3Y7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
KRT28Q7Z3Y7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
KRT28Q7Z3Y7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
KRT28Q7Z3Y7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
KRT28Q7Z3Y7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC31.56■■■□□ 2.64
KRT28Q7Z3Y7 C17orf82-201ENST00000623772 1530 ntBASIC31.55■■■□□ 2.64
KRT28Q7Z3Y7 AK1-201ENST00000223836 736 ntTSL 3 BASIC31.55■■■□□ 2.64
KRT28Q7Z3Y7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC31.55■■■□□ 2.64
KRT28Q7Z3Y7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.55■■■□□ 2.64
KRT28Q7Z3Y7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
KRT28Q7Z3Y7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KRT28Q7Z3Y7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC31.54■■■□□ 2.64
KRT28Q7Z3Y7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KRT28Q7Z3Y7 AC006455.2-201ENST00000429931 906 ntBASIC31.54■■■□□ 2.64
KRT28Q7Z3Y7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC31.54■■■□□ 2.64
KRT28Q7Z3Y7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
KRT28Q7Z3Y7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.54■■■□□ 2.64
KRT28Q7Z3Y7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KRT28Q7Z3Y7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
KRT28Q7Z3Y7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KRT28Q7Z3Y7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
KRT28Q7Z3Y7 BX842568.3-201ENST00000418104 571 ntBASIC31.53■■■□□ 2.64
KRT28Q7Z3Y7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
KRT28Q7Z3Y7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
KRT28Q7Z3Y7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.53■■■□□ 2.64
KRT28Q7Z3Y7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
KRT28Q7Z3Y7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
KRT28Q7Z3Y7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC31.52■■■□□ 2.64
KRT28Q7Z3Y7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC31.52■■■□□ 2.64
KRT28Q7Z3Y7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
KRT28Q7Z3Y7 AC241377.3-202ENST00000626088 1088 ntBASIC31.52■■■□□ 2.64
KRT28Q7Z3Y7 AC241585.3-202ENST00000628937 1088 ntBASIC31.52■■■□□ 2.64
KRT28Q7Z3Y7 AC245100.8-202ENST00000629247 1058 ntBASIC31.52■■■□□ 2.64
KRT28Q7Z3Y7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC31.52■■■□□ 2.64
KRT28Q7Z3Y7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
KRT28Q7Z3Y7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.64
KRT28Q7Z3Y7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
KRT28Q7Z3Y7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
KRT28Q7Z3Y7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
KRT28Q7Z3Y7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC31.51■■■□□ 2.63
KRT28Q7Z3Y7 GRAMD4P2-201ENST00000423297 1097 ntBASIC31.51■■■□□ 2.63
KRT28Q7Z3Y7 KRT18P5-201ENST00000436075 1291 ntBASIC31.51■■■□□ 2.63
KRT28Q7Z3Y7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC31.51■■■□□ 2.63
KRT28Q7Z3Y7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC31.51■■■□□ 2.63
KRT28Q7Z3Y7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
KRT28Q7Z3Y7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 AL137784.2-201ENST00000607332 1000 ntBASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 AL031602.1-201ENST00000633169 911 ntBASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.5■■■□□ 2.63
KRT28Q7Z3Y7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
KRT28Q7Z3Y7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.49■■■□□ 2.63
KRT28Q7Z3Y7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms