Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
MMP13P45452 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.9■■□□□ 1.42
MMP13P45452 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.9■■□□□ 1.42
MMP13P45452 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.89■■□□□ 1.42
MMP13P45452 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
MMP13P45452 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.89■■□□□ 1.41
MMP13P45452 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.89■■□□□ 1.41
MMP13P45452 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MMP13P45452 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.88■■□□□ 1.41
MMP13P45452 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
MMP13P45452 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MMP13P45452 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MMP13P45452 CLDN5-201ENST00000403084 2357 ntBASIC23.88■■□□□ 1.41
MMP13P45452 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
MMP13P45452 AC004812.2-201ENST00000611079 2094 ntBASIC23.88■■□□□ 1.41
MMP13P45452 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
MMP13P45452 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.87■■□□□ 1.41
MMP13P45452 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MMP13P45452 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.87■■□□□ 1.41
MMP13P45452 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
MMP13P45452 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MMP13P45452 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
MMP13P45452 KRT8P33-201ENST00000508125 1423 ntBASIC23.86■■□□□ 1.41
MMP13P45452 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
MMP13P45452 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
MMP13P45452 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.86■■□□□ 1.41
MMP13P45452 MIR4508-201ENST00000584178 70 ntBASIC23.86■■□□□ 1.41
MMP13P45452 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.86■■□□□ 1.41
MMP13P45452 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
MMP13P45452 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.85■■□□□ 1.41
MMP13P45452 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
MMP13P45452 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.85■■□□□ 1.41
MMP13P45452 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
MMP13P45452 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
MMP13P45452 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
MMP13P45452 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.85■■□□□ 1.41
MMP13P45452 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.85■■□□□ 1.41
MMP13P45452 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
MMP13P45452 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
MMP13P45452 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
MMP13P45452 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
MMP13P45452 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
MMP13P45452 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.84■■□□□ 1.41
MMP13P45452 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.84■■□□□ 1.41
MMP13P45452 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.84■■□□□ 1.41
MMP13P45452 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MMP13P45452 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MMP13P45452 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
MMP13P45452 AC103834.1-201ENST00000520383 144 ntBASIC23.84■■□□□ 1.41
MMP13P45452 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MMP13P45452 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.83■■□□□ 1.41
MMP13P45452 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
MMP13P45452 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MMP13P45452 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
MMP13P45452 AC090877.2-201ENST00000558441 1738 ntBASIC23.83■■□□□ 1.41
MMP13P45452 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.83■■□□□ 1.41
MMP13P45452 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
MMP13P45452 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MMP13P45452 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
MMP13P45452 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MMP13P45452 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MMP13P45452 YBX1P4-201ENST00000392794 808 ntBASIC23.82■■□□□ 1.4
MMP13P45452 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MMP13P45452 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
MMP13P45452 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
MMP13P45452 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MMP13P45452 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MMP13P45452 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MMP13P45452 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.81■■□□□ 1.4
MMP13P45452 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
MMP13P45452 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.81■■□□□ 1.4
MMP13P45452 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
MMP13P45452 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
MMP13P45452 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MMP13P45452 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
MMP13P45452 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MMP13P45452 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MMP13P45452 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
MMP13P45452 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
MMP13P45452 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MMP13P45452 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MMP13P45452 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MMP13P45452 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MMP13P45452 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.8■■□□□ 1.4
MMP13P45452 AC011551.1-201ENST00000614101 683 ntBASIC23.8■■□□□ 1.4
MMP13P45452 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MMP13P45452 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MMP13P45452 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.79■■□□□ 1.4
MMP13P45452 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
MMP13P45452 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.79■■□□□ 1.4
MMP13P45452 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.79■■□□□ 1.4
MMP13P45452 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MMP13P45452 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MMP13P45452 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MMP13P45452 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MMP13P45452 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.78■■□□□ 1.4
MMP13P45452 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
MMP13P45452 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MMP13P45452 AC120024.1-201ENST00000562672 995 ntBASIC23.78■■□□□ 1.4
MMP13P45452 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms