Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 FMP48YGR052W 1110 nt6.67□□□□□ -1.34
MSH4P40965 DJP1YIR004W 1299 nt6.67□□□□□ -1.34
MSH4P40965 MRS1YIR021W 1092 nt6.67□□□□□ -1.34
MSH4P40965 NPA3YJR072C 1158 nt6.67□□□□□ -1.34
MSH4P40965 YKL031WYKL031W 414 nt6.67□□□□□ -1.34
MSH4P40965 YML094C-AYML094C-A 402 nt6.67□□□□□ -1.34
MSH4P40965 NCE102YPR149W 522 nt6.67□□□□□ -1.34
MSH4P40965 FAT3YKL187C 2253 nt6.67□□□□□ -1.34
MSH4P40965 APE3YBR286W 1614 nt6.67□□□□□ -1.34
MSH4P40965 YDR109CYDR109C 2148 nt6.66□□□□□ -1.34
MSH4P40965 SPO74YGL170C 1242 nt6.66□□□□□ -1.34
MSH4P40965 YLR202CYLR202C 327 nt6.66□□□□□ -1.34
MSH4P40965 YLR296WYLR296W 327 nt6.66□□□□□ -1.34
MSH4P40965 TOM40YMR203W 1164 nt6.66□□□□□ -1.34
MSH4P40965 RUF5-1RUF5-1 710 nt6.66□□□□□ -1.34
MSH4P40965 YNR040WYNR040W 771 nt6.66□□□□□ -1.34
MSH4P40965 RUF5-2RUF5-2 710 nt6.66□□□□□ -1.34
MSH4P40965 YOR062CYOR062C 807 nt6.66□□□□□ -1.34
MSH4P40965 VMA4YOR332W 702 nt6.66□□□□□ -1.34
MSH4P40965 ORC5YNL261W 1440 nt6.66□□□□□ -1.34
MSH4P40965 AMD1YML035C 2433 nt6.66□□□□□ -1.34
MSH4P40965 PTM1YKL039W 1572 nt6.65□□□□□ -1.34
MSH4P40965 TNA1YGR260W 1605 nt6.65□□□□□ -1.34
MSH4P40965 ATR1YML116W 1629 nt6.65□□□□□ -1.34
MSH4P40965 SFB3YHR098C 2790 nt6.65□□□□□ -1.34
MSH4P40965 HIR1YBL008W 2523 nt6.65□□□□□ -1.34
MSH4P40965 NSE3YDR288W 912 nt6.65□□□□□ -1.34
MSH4P40965 ASP1YDR321W 1146 nt6.65□□□□□ -1.34
MSH4P40965 CWC21YDR482C 408 nt6.65□□□□□ -1.34
MSH4P40965 RPL7AYGL076C 735 nt6.65□□□□□ -1.34
MSH4P40965 YHR028W-AYHR028W-A 321 nt6.65□□□□□ -1.34
MSH4P40965 SUP2tY(GUA)D 75 nt6.65□□□□□ -1.34
MSH4P40965 SUP11tY(GUA)F1 75 nt6.65□□□□□ -1.34
MSH4P40965 SUP6tY(GUA)F2 75 nt6.65□□□□□ -1.34
MSH4P40965 SUP7tY(GUA)J1 75 nt6.65□□□□□ -1.34
MSH4P40965 SUP4tY(GUA)J2 75 nt6.65□□□□□ -1.34
MSH4P40965 SUP5tY(GUA)M1 75 nt6.65□□□□□ -1.34
MSH4P40965 SUP8tY(GUA)M2 75 nt6.65□□□□□ -1.34
MSH4P40965 SUP3tY(GUA)O 75 nt6.65□□□□□ -1.34
MSH4P40965 PSR1YLL010C 1284 nt6.65□□□□□ -1.34
MSH4P40965 RPL7BYPL198W 735 nt6.65□□□□□ -1.34
MSH4P40965 SUI3YPL237W 858 nt6.65□□□□□ -1.34
MSH4P40965 UBA3YPR066W 900 nt6.65□□□□□ -1.34
MSH4P40965 DXO1YDR370C 1329 nt6.65□□□□□ -1.35
MSH4P40965 TKL1YPR074C 2043 nt6.65□□□□□ -1.35
MSH4P40965 MRE11YMR224C 2079 nt6.65□□□□□ -1.35
MSH4P40965 HSP31YDR533C 714 nt6.64□□□□□ -1.35
MSH4P40965 ARP1YHR129C 1155 nt6.64□□□□□ -1.35
MSH4P40965 DCN1YLR128W 810 nt6.64□□□□□ -1.35
MSH4P40965 YLR307C-AYLR307C-A 264 nt6.64□□□□□ -1.35
MSH4P40965 YLR365WYLR365W 333 nt6.64□□□□□ -1.35
MSH4P40965 SEC17YBL050W 879 nt6.64□□□□□ -1.35
MSH4P40965 RPS9AYPL081W 594 nt6.64□□□□□ -1.35
MSH4P40965 YPR109WYPR109W 885 nt6.64□□□□□ -1.35
MSH4P40965 RPT1YKL145W 1404 nt6.64□□□□□ -1.35
MSH4P40965 SET5YHR207C 1581 nt6.64□□□□□ -1.35
MSH4P40965 GIR2YDR152W 798 nt6.63□□□□□ -1.35
MSH4P40965 FLC3YGL139W 2409 nt6.63□□□□□ -1.35
MSH4P40965 KSS1YGR040W 1107 nt6.63□□□□□ -1.35
MSH4P40965 SKI6YGR195W 741 nt6.63□□□□□ -1.35
MSH4P40965 ERG20YJL167W 1059 nt6.63□□□□□ -1.35
MSH4P40965 NDL1YLR254C 570 nt6.63□□□□□ -1.35
MSH4P40965 URA4YLR420W 1095 nt6.63□□□□□ -1.35
MSH4P40965 SPO20YMR017W 1194 nt6.63□□□□□ -1.35
MSH4P40965 YBL029WYBL029W 1131 nt6.63□□□□□ -1.35
MSH4P40965 LST8YNL006W 912 nt6.63□□□□□ -1.35
MSH4P40965 PBP2YBR233W 1242 nt6.63□□□□□ -1.35
MSH4P40965 RAD3YER171W 2337 nt6.62□□□□□ -1.35
MSH4P40965 MAD3YJL013C 1548 nt6.62□□□□□ -1.35
MSH4P40965 CLB1YGR108W 1416 nt6.62□□□□□ -1.35
MSH4P40965 HOS1YPR068C 1413 nt6.62□□□□□ -1.35
MSH4P40965 ESC2YDR363W 1371 nt6.62□□□□□ -1.35
MSH4P40965 ABD1YBR236C 1311 nt6.62□□□□□ -1.35
MSH4P40965 OXP1YKL215C 3861 nt6.62□□□□□ -1.35
MSH4P40965 YCL065WYCL065W 369 nt6.62□□□□□ -1.35
MSH4P40965 ERV14YGL054C 417 nt6.62□□□□□ -1.35
MSH4P40965 LST7YGR057C 729 nt6.62□□□□□ -1.35
MSH4P40965 SYN8YAL014C 768 nt6.62□□□□□ -1.35
MSH4P40965 YJU3YKL094W 942 nt6.62□□□□□ -1.35
MSH4P40965 KEX2YNL238W 2445 nt6.62□□□□□ -1.35
MSH4P40965 VBA1YMR088C 1689 nt6.61□□□□□ -1.35
MSH4P40965 HPM1YIL110W 1134 nt6.61□□□□□ -1.35
MSH4P40965 YMR178WYMR178W 825 nt6.61□□□□□ -1.35
MSH4P40965 IBD2YNL164C 1056 nt6.61□□□□□ -1.35
MSH4P40965 CUS2YNL286W 858 nt6.61□□□□□ -1.35
MSH4P40965 IZH4YOL101C 939 nt6.61□□□□□ -1.35
MSH4P40965 CAR1YPL111W 1002 nt6.61□□□□□ -1.35
MSH4P40965 YPL113CYPL113C 1191 nt6.61□□□□□ -1.35
MSH4P40965 ARR3YPR201W 1215 nt6.61□□□□□ -1.35
MSH4P40965 HXT3YDR345C 1704 nt6.61□□□□□ -1.35
MSH4P40965 SSK22YCR073C 3996 nt6.6□□□□□ -1.35
MSH4P40965 HIM1YDR317W 1245 nt6.6□□□□□ -1.35
MSH4P40965 YRA1YDR381W 681 nt6.6□□□□□ -1.35
MSH4P40965 HAP2YGL237C 798 nt6.6□□□□□ -1.35
MSH4P40965 ARD1YHR013C 717 nt6.6□□□□□ -1.35
MSH4P40965 GAT4YIR013C 366 nt6.6□□□□□ -1.35
MSH4P40965 YLR271WYLR271W 825 nt6.6□□□□□ -1.35
MSH4P40965 MRPL15YLR312W-A 762 nt6.6□□□□□ -1.35
MSH4P40965 YNL108CYNL108C 813 nt6.6□□□□□ -1.35
MSH4P40965 CBP6YBR120C 489 nt6.6□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 60.9 ms