Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.73■■□□□ 1.07
SIMC1Q8NDZ2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIMC1Q8NDZ2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
SIMC1Q8NDZ2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIMC1Q8NDZ2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIMC1Q8NDZ2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SIMC1Q8NDZ2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIMC1Q8NDZ2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.72■■□□□ 1.07
SIMC1Q8NDZ2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.72■■□□□ 1.07
SIMC1Q8NDZ2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIMC1Q8NDZ2 AC022616.5-201ENST00000518796 181 ntBASIC21.72■■□□□ 1.07
SIMC1Q8NDZ2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIMC1Q8NDZ2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIMC1Q8NDZ2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
SIMC1Q8NDZ2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIMC1Q8NDZ2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SIMC1Q8NDZ2 AC133561.1-201ENST00000568600 2415 ntBASIC21.71■■□□□ 1.07
SIMC1Q8NDZ2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.71■■□□□ 1.07
SIMC1Q8NDZ2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SIMC1Q8NDZ2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIMC1Q8NDZ2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
SIMC1Q8NDZ2 AC012676.1-201ENST00000574705 1949 ntBASIC21.71■■□□□ 1.07
SIMC1Q8NDZ2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SIMC1Q8NDZ2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIMC1Q8NDZ2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.71■■□□□ 1.07
SIMC1Q8NDZ2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
SIMC1Q8NDZ2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.7■■□□□ 1.06
SIMC1Q8NDZ2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIMC1Q8NDZ2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIMC1Q8NDZ2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.7■■□□□ 1.06
SIMC1Q8NDZ2 RARRES2P1-201ENST00000474487 481 ntBASIC21.7■■□□□ 1.06
SIMC1Q8NDZ2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIMC1Q8NDZ2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIMC1Q8NDZ2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIMC1Q8NDZ2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIMC1Q8NDZ2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.69■■□□□ 1.06
SIMC1Q8NDZ2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SIMC1Q8NDZ2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIMC1Q8NDZ2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SIMC1Q8NDZ2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.69■■□□□ 1.06
SIMC1Q8NDZ2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIMC1Q8NDZ2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.69■■□□□ 1.06
SIMC1Q8NDZ2 KRT18P24-201ENST00000344739 1156 ntBASIC21.68■■□□□ 1.06
SIMC1Q8NDZ2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.68■■□□□ 1.06
SIMC1Q8NDZ2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIMC1Q8NDZ2 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.68■■□□□ 1.06
SIMC1Q8NDZ2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SIMC1Q8NDZ2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.68■■□□□ 1.06
SIMC1Q8NDZ2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIMC1Q8NDZ2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SIMC1Q8NDZ2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 YBX1P4-201ENST00000392794 808 ntBASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 AC011551.1-201ENST00000614101 683 ntBASIC21.67■■□□□ 1.06
SIMC1Q8NDZ2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIMC1Q8NDZ2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIMC1Q8NDZ2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
SIMC1Q8NDZ2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIMC1Q8NDZ2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SIMC1Q8NDZ2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
SIMC1Q8NDZ2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.66■■□□□ 1.06
SIMC1Q8NDZ2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SIMC1Q8NDZ2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.65■■□□□ 1.06
SIMC1Q8NDZ2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIMC1Q8NDZ2 THA1P-201ENST00000590384 1145 ntBASIC21.65■■□□□ 1.06
SIMC1Q8NDZ2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIMC1Q8NDZ2 AC004812.2-201ENST00000611079 2094 ntBASIC21.65■■□□□ 1.06
SIMC1Q8NDZ2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.65■■□□□ 1.06
SIMC1Q8NDZ2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SIMC1Q8NDZ2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SIMC1Q8NDZ2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.64■■□□□ 1.05
SIMC1Q8NDZ2 MIR4281-201ENST00000580852 62 ntBASIC21.64■■□□□ 1.05
SIMC1Q8NDZ2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SIMC1Q8NDZ2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SIMC1Q8NDZ2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SIMC1Q8NDZ2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SIMC1Q8NDZ2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIMC1Q8NDZ2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.63■■□□□ 1.05
SIMC1Q8NDZ2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.63■■□□□ 1.05
SIMC1Q8NDZ2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIMC1Q8NDZ2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIMC1Q8NDZ2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIMC1Q8NDZ2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.63■■□□□ 1.05
SIMC1Q8NDZ2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIMC1Q8NDZ2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.62■■□□□ 1.05
SIMC1Q8NDZ2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIMC1Q8NDZ2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SIMC1Q8NDZ2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIMC1Q8NDZ2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.62■■□□□ 1.05
SIMC1Q8NDZ2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms