Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AC133552.2-201ENST00000619106 1032 ntBASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 AC068473.5-201ENST00000616428 2072 ntBASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR2J3Q9H1A7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
POLR2J3Q9H1A7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.38■■□□□ 1.01
POLR2J3Q9H1A7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.38■■□□□ 1.01
POLR2J3Q9H1A7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
POLR2J3Q9H1A7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.37■■□□□ 1.01
POLR2J3Q9H1A7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR2J3Q9H1A7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR2J3Q9H1A7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
POLR2J3Q9H1A7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
POLR2J3Q9H1A7 HLA-L-211ENST00000482052 1765 ntBASIC21.37■■□□□ 1.01
POLR2J3Q9H1A7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
POLR2J3Q9H1A7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR2J3Q9H1A7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR2J3Q9H1A7 DUSP8P5-201ENST00000422884 1815 ntBASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 ABCB10P4-201ENST00000566803 2184 ntBASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR2J3Q9H1A7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
POLR2J3Q9H1A7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
POLR2J3Q9H1A7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
POLR2J3Q9H1A7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
POLR2J3Q9H1A7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.35■■□□□ 1.01
POLR2J3Q9H1A7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
POLR2J3Q9H1A7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
POLR2J3Q9H1A7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR2J3Q9H1A7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
POLR2J3Q9H1A7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
POLR2J3Q9H1A7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR2J3Q9H1A7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR2J3Q9H1A7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.34■■□□□ 1.01
POLR2J3Q9H1A7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
POLR2J3Q9H1A7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.34■■□□□ 1.01
POLR2J3Q9H1A7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
POLR2J3Q9H1A7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.33■■□□□ 1.01
POLR2J3Q9H1A7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR2J3Q9H1A7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
POLR2J3Q9H1A7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR2J3Q9H1A7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
POLR2J3Q9H1A7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.33■■□□□ 1.01
POLR2J3Q9H1A7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.33■■□□□ 1.01
POLR2J3Q9H1A7 RPS2P7-201ENST00000447334 885 ntBASIC21.33■■□□□ 1.01
POLR2J3Q9H1A7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
POLR2J3Q9H1A7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.33■■□□□ 1
POLR2J3Q9H1A7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.33■■□□□ 1
POLR2J3Q9H1A7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
POLR2J3Q9H1A7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.32■■□□□ 1
POLR2J3Q9H1A7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR2J3Q9H1A7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
POLR2J3Q9H1A7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
POLR2J3Q9H1A7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR2J3Q9H1A7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.32■■□□□ 1
POLR2J3Q9H1A7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
POLR2J3Q9H1A7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.31■■□□□ 1
POLR2J3Q9H1A7 AC018755.3-202ENST00000596210 929 ntBASIC21.31■■□□□ 1
POLR2J3Q9H1A7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR2J3Q9H1A7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
POLR2J3Q9H1A7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
POLR2J3Q9H1A7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.3■■□□□ 1
POLR2J3Q9H1A7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR2J3Q9H1A7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR2J3Q9H1A7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
POLR2J3Q9H1A7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR2J3Q9H1A7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.29■■□□□ 1
POLR2J3Q9H1A7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR2J3Q9H1A7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
POLR2J3Q9H1A7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR2J3Q9H1A7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR2J3Q9H1A7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR2J3Q9H1A7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms