Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
COMMD4Q9H0A8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COMMD4Q9H0A8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD4Q9H0A8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD4Q9H0A8 FOXO3B-201ENST00000395675 1928 ntBASIC20.4■□□□□ 0.86
COMMD4Q9H0A8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD4Q9H0A8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.4■□□□□ 0.86
COMMD4Q9H0A8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD4Q9H0A8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.4■□□□□ 0.86
COMMD4Q9H0A8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COMMD4Q9H0A8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COMMD4Q9H0A8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
COMMD4Q9H0A8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD4Q9H0A8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD4Q9H0A8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
COMMD4Q9H0A8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.39■□□□□ 0.85
COMMD4Q9H0A8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.39■□□□□ 0.85
COMMD4Q9H0A8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD4Q9H0A8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
COMMD4Q9H0A8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
COMMD4Q9H0A8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COMMD4Q9H0A8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
COMMD4Q9H0A8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD4Q9H0A8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COMMD4Q9H0A8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
COMMD4Q9H0A8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.38■□□□□ 0.85
COMMD4Q9H0A8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.38■□□□□ 0.85
COMMD4Q9H0A8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD4Q9H0A8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COMMD4Q9H0A8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD4Q9H0A8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD4Q9H0A8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.38■□□□□ 0.85
COMMD4Q9H0A8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
COMMD4Q9H0A8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.37■□□□□ 0.85
COMMD4Q9H0A8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.37■□□□□ 0.85
COMMD4Q9H0A8 AC022413.1-201ENST00000624602 984 ntBASIC20.37■□□□□ 0.85
COMMD4Q9H0A8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD4Q9H0A8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD4Q9H0A8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
COMMD4Q9H0A8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD4Q9H0A8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
COMMD4Q9H0A8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD4Q9H0A8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD4Q9H0A8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.36■□□□□ 0.85
COMMD4Q9H0A8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD4Q9H0A8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD4Q9H0A8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD4Q9H0A8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
COMMD4Q9H0A8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.36■□□□□ 0.85
COMMD4Q9H0A8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD4Q9H0A8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.35■□□□□ 0.85
COMMD4Q9H0A8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD4Q9H0A8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.35■□□□□ 0.85
COMMD4Q9H0A8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD4Q9H0A8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 AC007029.1-201ENST00000604183 313 ntBASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD4Q9H0A8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD4Q9H0A8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD4Q9H0A8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD4Q9H0A8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD4Q9H0A8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.33■□□□□ 0.85
COMMD4Q9H0A8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD4Q9H0A8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.33■□□□□ 0.84
COMMD4Q9H0A8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.32■□□□□ 0.84
COMMD4Q9H0A8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms