Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RFX6Q8HWS3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.09■■□□□ 1.45
RFX6Q8HWS3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RFX6Q8HWS3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RFX6Q8HWS3 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.09■■□□□ 1.45
RFX6Q8HWS3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.09■■□□□ 1.45
RFX6Q8HWS3 AC090877.2-201ENST00000558441 1738 ntBASIC24.09■■□□□ 1.45
RFX6Q8HWS3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RFX6Q8HWS3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RFX6Q8HWS3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.09■■□□□ 1.45
RFX6Q8HWS3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
RFX6Q8HWS3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RFX6Q8HWS3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RFX6Q8HWS3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RFX6Q8HWS3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.08■■□□□ 1.45
RFX6Q8HWS3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RFX6Q8HWS3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.07■■□□□ 1.44
RFX6Q8HWS3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.07■■□□□ 1.44
RFX6Q8HWS3 AC139795.1-202ENST00000500444 432 ntBASIC24.07■■□□□ 1.44
RFX6Q8HWS3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RFX6Q8HWS3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RFX6Q8HWS3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RFX6Q8HWS3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RFX6Q8HWS3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.06■■□□□ 1.44
RFX6Q8HWS3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RFX6Q8HWS3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.05■■□□□ 1.44
RFX6Q8HWS3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RFX6Q8HWS3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RFX6Q8HWS3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
RFX6Q8HWS3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RFX6Q8HWS3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.05■■□□□ 1.44
RFX6Q8HWS3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RFX6Q8HWS3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.04■■□□□ 1.44
RFX6Q8HWS3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RFX6Q8HWS3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RFX6Q8HWS3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.04■■□□□ 1.44
RFX6Q8HWS3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.04■■□□□ 1.44
RFX6Q8HWS3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.04■■□□□ 1.44
RFX6Q8HWS3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RFX6Q8HWS3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RFX6Q8HWS3 ABCB10P4-201ENST00000566803 2184 ntBASIC24.03■■□□□ 1.44
RFX6Q8HWS3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RFX6Q8HWS3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
RFX6Q8HWS3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
RFX6Q8HWS3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.03■■□□□ 1.44
RFX6Q8HWS3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RFX6Q8HWS3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RFX6Q8HWS3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RFX6Q8HWS3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.03■■□□□ 1.44
RFX6Q8HWS3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.03■■□□□ 1.44
RFX6Q8HWS3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RFX6Q8HWS3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RFX6Q8HWS3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
RFX6Q8HWS3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RFX6Q8HWS3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.02■■□□□ 1.44
RFX6Q8HWS3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
RFX6Q8HWS3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RFX6Q8HWS3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RFX6Q8HWS3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RFX6Q8HWS3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RFX6Q8HWS3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RFX6Q8HWS3 AC004987.1-201ENST00000428627 508 ntBASIC24.01■■□□□ 1.43
RFX6Q8HWS3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RFX6Q8HWS3 BHLHE23-202ENST00000612929 1109 ntBASIC24.01■■□□□ 1.43
RFX6Q8HWS3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RFX6Q8HWS3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RFX6Q8HWS3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RFX6Q8HWS3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RFX6Q8HWS3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RFX6Q8HWS3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24■■□□□ 1.43
RFX6Q8HWS3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24■■□□□ 1.43
RFX6Q8HWS3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RFX6Q8HWS3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24■■□□□ 1.43
RFX6Q8HWS3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RFX6Q8HWS3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.99■■□□□ 1.43
RFX6Q8HWS3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFX6Q8HWS3 ATP5G2P3-201ENST00000429083 425 ntBASIC23.99■■□□□ 1.43
RFX6Q8HWS3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFX6Q8HWS3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RFX6Q8HWS3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFX6Q8HWS3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFX6Q8HWS3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RFX6Q8HWS3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFX6Q8HWS3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFX6Q8HWS3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.98■■□□□ 1.43
RFX6Q8HWS3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.98■■□□□ 1.43
RFX6Q8HWS3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RFX6Q8HWS3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RFX6Q8HWS3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
RFX6Q8HWS3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.98■■□□□ 1.43
RFX6Q8HWS3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX6Q8HWS3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RFX6Q8HWS3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX6Q8HWS3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX6Q8HWS3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.97■■□□□ 1.43
RFX6Q8HWS3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX6Q8HWS3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.97■■□□□ 1.43
RFX6Q8HWS3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX6Q8HWS3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFX6Q8HWS3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms